Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq9 82.4 6e-11 >seq9 Length=1602328 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 49127 GTTAAACAGTATGACGCCGAGGTTGCCCCTGTAGTCGGGGTCCACCACCCCGGCACCGAC 49186 ||| || || | |||||||| | ||| | |||||||| ||| || || || || ||||| Sbjct 1246262 GTTGAAGAGCACGACGCCGACGGCGCCGCGGTAGTCGGCGTCGACGACGCCCGCGCCGAC 1246203 Query 49187 GTCTATAAAATTTTTCAGGGCCAGGCCGGACCTGGGAGCCACCCTGCCGTAGAGGCCCGG 49246 ||| | || || || | || |||||||||| || || | | ||||| | | Sbjct 1246202 GTCGACGAACTTCTTGACCGCGAGGCCGGACCGCGGCGCGATGCGCGCGTAGCAGTCGCC 1246143 Query 49247 GGGCATCTTCACGGCCAGGTCCGTCTTTACCAGGGCCCTGTCGAAGGAGGGGACCACGAC 49306 |||| || || ||||||||||||| || | |||| || || | ||| || ||||| Sbjct 1246142 GGGCGTCGCCATGGCCAGGTCCGTCGGCACGATGGCCTTGCCGCGCGCGGGCACGACGAC 1246083 Query 49307 CGGGTGAGCGGCCGCCAGGTCGTAACCCGCGGC 49339 || || || ||||| || | |||||||| Sbjct 1246082 GGGCTGGCTCGCGGCCAGATCCCAGCCCGCGGC 1246050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406304531989020