Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq6 114 5e-21 >seq6 Length=2755913 Score = 114 bits (126), Expect = 5e-21 Identities = 176/243 (72%), Gaps = 6/243 (2%) Strand=Plus/Plus Query 31006 CATGCACATGTGTCGCGCCTTAATGACCACACCGACGCC-CTTGGCTTCCAGGTGCTCGA 31064 |||||||||||| ||||| | ||| || |||||||| | ||| |||| |||| Sbjct 2192200 CATGCACATGTGCGTCGCCTCGACGACGACGCCGACGCCGCAGGGCCCGCAGG-CCTCGG 2192258 Query 31065 ACAGTGCGTCCGCGATCTG-GTCTGTGAGCCGTTCCTGCACTTGCAGGCGGCGAGCATAC 31123 | || || |||||||| ||| |||||||| |||||||| |||||||| || || Sbjct 2192259 CGACGGCCTCGGCGATCTGCGTC-GTGAGCCGCTCCTGCACCTGCAGGCGCTTCGCGAAC 2192317 Query 31124 ATGTCCGCCAGGCGGGACAGCTTGCTCAGGCCCACGATACGACCGTTCGGAATGTAGCTG 31183 |||| || | ||| | |||||| |||||||| || ||||| || |||||| | Sbjct 2192318 ATGTGGGCGATGCGCGCGAGCTTGGACAGGCCCAGGACCTTGCCGTTGGGGATGTAGGCG 2192377 Query 31184 ATCGTGAC-CGTGCCGAAGATCGGCGCGAGGTGATGCTCGCAATGTGAGTAGATGGGGAT 31242 || ||| | | ||||||||| ||| ||| ||| |||||||| | ||||||| |||| Sbjct 2192378 AT-GTGGCACTTGCCGAAGAAGGGCACGACGTGGTGCTCGCAGAGCGAGTAGAGCTGGAT 2192436 Query 31243 GTC 31245 ||| Sbjct 2192437 GTC 2192439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187286964484160