Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq6 120 7e-22 seq240 116 9e-21 seq34 116 9e-21 seq10 111 4e-19 seq28 107 4e-18 seq5 104 5e-17 seq2 93.3 1e-13 seq26 89.7 1e-12 seq4 86.0 1e-11 seq16 84.2 5e-11 >seq6 Length=2755913 Score = 120 bits (132), Expect = 7e-22 Identities = 153/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || || || || || |||||||||||||||||||| ||| | || | || || Sbjct 2370909 GAGCACGAGGTGCAGCGTCGACTCTTTTTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTC 2370968 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || |||||||| || || |||| ||||||||||| || ||| || ||||| || Sbjct 2370969 CTCGAGCTGCTTCCCGGCAAAAATGAGCCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTC 2371028 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| |||||||| || || | || | | |||| ||| || || || || || || Sbjct 2371029 TTGGATTTTTTGCTTCACGTTGTCGATGGTGTCGCTGGGCTCGACGTCGAGCGTGATCGT 2371088 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGC 152102 || ||||| || ||||| ||||||| |||| Sbjct 2371089 CTTCCCCGTCAGGGTCTTGACGAAGATCTGC 2371119 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || || || || || ||||| |||||||||||||| ||| | || | || || Sbjct 2370681 GAGCACGAGGTGGAGCGTCGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTCCGGCCGTC 2370740 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || ||||||||||| || |||| ||||||||||| || ||| || ||||| || Sbjct 2370741 CTCGAGCTGCTTCCCGGCGAATATGAGCCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTC 2370800 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || |||||||| || || | || | | |||| ||| || || || || || || Sbjct 2370801 CTGTATTTTTTGCTTCACGTTGTCGATGGTGTCGCTCGGCTCGACGTCGAGCGTGATCGT 2370860 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || ||||| ||||| | ||||| Sbjct 2370861 CTTCCCCGTCAGGGTCTTGACGAAAATTTGCAT 2370893 >seq240 Length=9970 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || || || ||||| || ||||||||||| ||| | || | ||||| Sbjct 1495 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCATCC 1436 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || |||||||| || | ||||||||||| | ||| || ||||| || Sbjct 1435 TCGAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCC 1376 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || || || | || | |||| || ||| || || || || || ||| Sbjct 1375 TGGATCTTCTGCTTCACGTTGTCGATCGTGTCCGAGGGCTCCACGTCGAGCGTGATGGTT 1316 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||||| ||||| ||||||| |||||| Sbjct 1315 TTGCCCGTGAGCGTCTTGACGAAGATCTGCAT 1284 >seq34 Length=376640 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || || || ||||| || ||||||||||| ||| | || | ||||| Sbjct 72726 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCATCC 72785 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || |||||||| || | ||||||||||| | ||| || ||||| || Sbjct 72786 TCGAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCC 72845 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || || || | || | |||| || ||| || || || || || ||| Sbjct 72846 TGGATCTTCTGCTTCACGTTGTCGATCGTGTCCGAGGGCTCCACGTCGAGCGTGATGGTT 72905 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||||| ||||| ||||||| |||||| Sbjct 72906 TTGCCCGTGAGCGTCTTGACGAAGATCTGCAT 72937 >seq10 Length=1654512 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| || || || || ||||| || ||||||||||| ||| | || | Sbjct 861925 GAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCG 861984 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || || |||||||| || | ||||||||||| | ||| || || Sbjct 861985 GCCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTC 862044 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || || || || | || | |||| || ||| || || || || Sbjct 862045 CTTGTCCTGGATCTTCTGCTTCACGTTGTCGATCGTGTCCGAGGGCTCGACGTCGAGCGT 862104 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||||||||| ||||| ||||||| |||||| Sbjct 862105 GATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 862143 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| || || || || ||||| || ||||||||||| ||| | || | Sbjct 862153 GAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCG 862212 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || || |||||||| || | ||||||||||| | ||| || || Sbjct 862213 GCCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTC 862272 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || || || || | || | |||| || ||| || || || || Sbjct 862273 CTTGTCCTGGATCTTCTGCTTCACGTTGTCGATCGTGTCCGAGGGCTCGACGTCGAGCGT 862332 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||||||||| ||||| ||||||| |||||| Sbjct 862333 GATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 862371 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| || || || || ||||| || ||||||||||| ||| | || | Sbjct 862381 GAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCG 862440 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || || |||||||| || | ||||||||||| | ||| || || Sbjct 862441 GCCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTC 862500 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || || || || | || | |||| || ||| || || || || Sbjct 862501 CTTGTCCTGGATCTTCTGCTTCACGTTGTCGATCGTGTCCGAGGGCTCGACGTCGAGCGT 862560 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||||||||| ||||| ||||||| |||||| Sbjct 862561 GATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 862599 >seq28 Length=462849 Score = 107 bits (118), Expect = 4e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| || || || || ||||| || ||||||||||| ||| | || | Sbjct 34764 GAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCG 34705 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || || |||||||| || | ||||||||||| | ||| || || Sbjct 34704 GCCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTC 34645 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || || || || | || | |||| || ||| || || || || Sbjct 34644 CTTGTCCTGGATCTTCTGCTTCACGTTGTCGATCGTGTCCGAGGGCTCGACGTCGAGCGT 34585 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || |||||||| ||||| ||||||| |||||| Sbjct 34584 GATCGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 34546 >seq5 Length=3000003 Score = 104 bits (114), Expect = 5e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || || || ||||| || ||||||||||| ||| | || | ||||| Sbjct 733091 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCATCC 733150 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || |||||||| || | ||||||||||| | ||| || ||||| || Sbjct 733151 TCGAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCC 733210 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || || || | || | |||| ||| || || || || || || Sbjct 733211 TGGATCTTCTGCTTCACGTTGTCGATCGTGTCGCTGGGCTCGACGTCGAGCGTGATGGTC 733270 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||||| ||||| ||||||| |||||| Sbjct 733271 TTGCCCGTGAGCGTCTTGACGAAGATCTGCAT 733302 >seq2 Length=3465789 Score = 93.3 bits (102), Expect = 1e-13 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || || || || || ||||| || ||||||||||| ||| | || | || || Sbjct 660823 GAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTC 660882 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || |||||||||||||| || | ||||||||||| | ||| || ||||| || Sbjct 660883 CTCGAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTC 660942 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || || || || | || | | |||| ||| || || || || || || Sbjct 660943 CTGGATCTTCTGCTTCACGTTGTCGATGGTGTCGCTGGGCTCGACATCGAGCGTGATCGT 661002 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGC 152102 || ||||| || ||||| ||||| | |||| Sbjct 661003 CTTCCCCGTCAGGGTCTTGACGAAAATCTGC 661033 >seq26 Length=549629 Score = 89.7 bits (98), Expect = 1e-12 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || || || || || ||||| || ||||||||||| ||| | || | Sbjct 459810 GAGCCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCG 459869 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || ||||||||||| | | ||||||||||| | ||| || || Sbjct 459870 GCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCCGGGGGGATGCCCTC 459929 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || || || || | || | |||| ||| || || || || Sbjct 459930 CTTGTCCTGGATCTTCTGCTTCACGTTGTCGATCGTGTCGCTGGGCTCGACGTCGAGCGT 459989 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||| ||||| ||||||| |||||| Sbjct 459990 GATCGTCTTCCCGGTGAGCGTCTTGACGAAGATCTGCAT 460028 >seq4 Length=3024044 Score = 86.0 bits (94), Expect = 1e-11 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || || || || || ||||| || ||||||||||| ||| | || | Sbjct 2039894 GAGCCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTCCG 2039953 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || ||||| |||||||| | | ||||||||| | | ||| || || Sbjct 2039954 GCCGTCCTCGAGCTGCTTCCCCGCGAAGATCAATCGCTGCTGGTCAGGGGGGATGCCCTC 2040013 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || || || || | || | |||| ||| || || || || Sbjct 2040014 CTTGTCCTGGATCTTCTGCTTCACGTTGTCGATCGTGTCGCTCGGCTCGACGTCGAGCGT 2040073 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGC 152102 || || |||||||| || || |||||||||| |||| Sbjct 2040074 GATCGTCTTGCCCGTCAGGGTTTTCACGAAGATCTGC 2040110 >seq16 Length=966663 Score = 84.2 bits (92), Expect = 5e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || || |||||||| || | ||||||||||| | ||| || ||||| || || || || Sbjct 441979 TTGCCCGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTC 441920 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 || ||||| | || | |||| || ||| || || || || || || ||||| ||| Sbjct 441919 TGCTTGACGTTGTCGATCGTGTCGGACGGCTCGACGTCGAGCGTGATCGTCTTGCCGGTG 441860 Query 152082 AGAGTCTTCACGAAGACCTGC 152102 || || |||||||||| |||| Sbjct 441859 AGGGTTTTCACGAAGATCTGC 441839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153803281755135