Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastocystis_20hominis_20[genbank_20GCA_5F000151665.1_202010-07-06] 54 sequences; 18,817,245 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 3e-14 >seq2 Length=1866585 Score = 93.3 bits (102), Expect = 3e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 |||||||| || || || || |||||||| || ||| | | | || || | || Sbjct 484751 TGAAGGGTCGATTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGTCCATCCTCGAGCTGC 484810 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || ||||| | |||||||| || || || |||||||| || ||||| ||| ||| Sbjct 484811 TTTCCAGCAAAGATCAAACGCTGCTGATCTGGGGGAATTCCCTCCTTGTCCTGAATCTTG 484870 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| || | || |||||||| | || ||||| | ||| || || || || ||| Sbjct 484871 GCCTTCACGTTCTCGATGGTATCAGAAGACTCCACATCAAGGGTGATCGTCTTTCCAGTC 484930 Query 15341 AGAGTTTTTACAAAAATTTGCATATTTGAAAATA 15374 | ||| ||||| |||||||||||||| || ||| Sbjct 484931 AAAGTCTTTACGAAAATTTGCATATTATAATATA 484964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362178961640814