Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastocystis_20hominis_20[genbank_20GCA_5F000151665.1_202010-07-06] 54 sequences; 18,817,245 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq3 95.1 1e-14 seq2 95.1 1e-14 >seq3 Length=640322 Score = 95.1 bits (104), Expect = 1e-14 Identities = 107/141 (76%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 15059 GGCGACAAGTTTTGCTCT-GGTATGGCGCAAAAGGGCACGTGCGGCATGATTTTCCCCCA 15117 ||||||||||| | ||| || | || ||| |||||| | | | || | | || || Sbjct 339031 GGCGACAAGTTCTCCTCGCGGCACGG-GCAGAAGGGCGTGCTCTCCGTGCTGTGGCCGCA 338973 Query 15118 GGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCATCAACCCCAACTG 15177 | ||||||||||| ||||| || ||||| ||||||||| ||||||||||||||| Sbjct 338972 GATCGACATGCCCTTCACCGCCTCCGGCATCACGCCCGACTGCATCATCAACCCCAACGC 338913 Query 15178 CATCCCGTCCCGCATGACCAT 15198 | |||| |||||||||||||| Sbjct 338912 CTTCCCCTCCCGCATGACCAT 338892 >seq2 Length=1866585 Score = 95.1 bits (104), Expect = 1e-14 Identities = 107/141 (76%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 15059 GGCGACAAGTTTTGCTCT-GGTATGGCGCAAAAGGGCACGTGCGGCATGATTTTCCCCCA 15117 ||||||||||| | ||| || | || ||| |||||| | | | || | | || || Sbjct 90219 GGCGACAAGTTCTCCTCGCGGCACGG-GCAGAAGGGCGTGCTCTCCGTGCTGTGGCCGCA 90277 Query 15118 GGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCATCAACCCCAACTG 15177 | ||||||||||| ||||| || ||||| ||||||||| ||||||||||||||| Sbjct 90278 GATCGACATGCCCTTCACCGCCTCCGGCATCACGCCCGACTGCATCATCAACCCCAACGC 90337 Query 15178 CATCCCGTCCCGCATGACCAT 15198 | |||| |||||||||||||| Sbjct 90338 CTTCCCCTCCCGCATGACCAT 90358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611391587310400