Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastocystis_20hominis_20[genbank_20GCA_5F000151665.1_202010-07-06] 54 sequences; 18,817,245 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 5e-12 >seq2 Length=1866585 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| || ||||||||||| || | |||||| ||| || || || || ||| Sbjct 484757 GTCGATTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGTCCATCCTCGAGCTGCTTTCCA 484816 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| | |||||| || || || ||||| || || ||||| |||||| || Sbjct 484817 GCAAAGATCAAACGCTGCTGATCTGGGGGAATTCCCTCCTTGTCCTGAATCTTGGCCTTC 484876 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||| || | || || || || | ||| | ||| || || |||| ||| Sbjct 484877 ACGTTCTCGATGGTATCAGAAGACTCCACATCAAGGGTGATCGTCTTTCCAGTCAAAGTC 484936 Query 114366 TTTACAAAAATCTGCAT 114382 ||||| ||||| ||||| Sbjct 484937 TTTACGAAAATTTGCAT 484953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134123499048