Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastocystis_20hominis_20[genbank_20GCA_5F000151665.1_202010-07-06] 54 sequences; 18,817,245 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 1e-14 >seq2 Length=1866585 Score = 95.1 bits (104), Expect = 1e-14 Identities = 167/240 (70%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | || | || | | | || ||||| |||||||||||||| Sbjct 484727 CCACCGCGCAGACGAAGTACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCAGAA 484786 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| |||||||| || || || | | |||| | |||||| || || || || Sbjct 484787 AGAGTACGTCCATCCTCGAGCTGCTTTCCAGCAAAGATCAAACGCTGCTGATCTGGGGGA 484846 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| | || | || | | || | ||| || | |||||||| Sbjct 484847 ATTCCCTCCTTGTC-CTGAATCTTGGCCTTCACGTTCTCGATGGTATCAGAAGACTCCAC 484905 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCTTATAATAT 138626 || | || | ||| || ||||||| ||| ||||| ||||| ||||| ||||||||| Sbjct 484906 ATCAAGGGTGATCGTCTTTCCAGTCAAAGTCTTTACGAAAATTTGCAT--ATTATAATAT 484963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262065022880