Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastocystis_20hominis_20[genbank_20GCA_5F000151665.1_202010-07-06] 54 sequences; 18,817,245 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq51 86.0 6e-12 >seq51 Length=900598 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 45113 TCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCT 45172 |||||| || || | | ||| || || || || || ||||| ||||| || || || Sbjct 383031 TCCTCCACGCAGACGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 382972 Query 45173 GACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGG 45232 | || | || || | || ||||| ||| | |||| || ||||| || || || Sbjct 382971 AAGAGTGCGACCGTCCTCGAGCTGCTTTCCAGCGAAAATCAGACGCTGCTGATCTGGGGG 382912 Query 45233 AATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGA 45291 ||| || || ||||| ||||| || || | || | || | |||||| |||||||||| Sbjct 382911 AATTCCCTCCTTATCCTGAATCTTGGCCTTCA-CGTTCTCGATGGTGTCCGAAGACTCGA 382853 Query 45292 CTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || ||||| | || || || || ||||| || || || |||||||| Sbjct 382852 CATCAAGAGTGATGGTCTTTCCAGTGAGAGTCTTAACGAAGATTTGCAT 382804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002894897840