Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastocystis_20hominis_20[genbank_20GCA_5F000151665.1_202010-07-06] 54 sequences; 18,817,245 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq51 354 1e-92 >seq51 Length=900598 Score = 354 bits (392), Expect = 1e-92 Identities = 862/1288 (67%), Gaps = 31/1288 (2%) Strand=Plus/Plus Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || |||||||| || ||||| | ||||| || || || | ||||| | | ||| Sbjct 101742 GTCGAGAAGATCTGCGACTTCTTCGTGGGAATGGTGGTGTTACGGGGAATCAGCACCGTC 101801 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || | || || || || || || ||||||||||| | ||| |||| || | |||| Sbjct 101802 ATCACGCCTCCGGCCGTCTCCAGACCCAGAGACAGAGGAGCCACATCCAGCAGCAGCAGG 101861 Query 6989 TCTTGAACAGATTCGTTCCCTTCACC----CGTTAAG-ATGGCGGCTTGGACCGTCGCCC 7043 || | ||| || | |||| || || | || | ||| || || || ||||| | Sbjct 101862 TCGTC--CAGCTTGCTGCCCTGGCCCTTGCCGCTCAGCACGGCCGCCTGCACGGTCGCTC 101919 Query 7044 CGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAAT 7103 |||| || || |||||||||||||| || | | || || || ||||| || | | Sbjct 101920 CGTAAGCCACAGCCTCATCGGGGTTGATGCTCTGGCAAAGCTCCTTGCCGTTGAAGAACT 101979 Query 7104 CCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCAT 7163 || | ||| | || | || || || || | ||||| || |||| || | || | Sbjct 101980 CCTGCAGCATCTTCTGCACCTTGGGAATACGCGAGGATCCTCCCACCAGCACCACCTCGT 102039 Query 7164 TCACTTTCGATTTATCGAT--CTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACA 7221 ||| | | | | |||| ||| | ||| || || || || ||||| || Sbjct 102040 CCACCTG-GCTCT-TCGACAGCTTCGCGTCGCGCAGCACCTTCTCCACAGGAGTGATCGT 102097 Query 7222 TTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAAT--GGATGTATAG 7279 || ||||| |||||||| || ||||| ||||| ||||| || || || ||| | Sbjct 102098 CTTGCGGAAGAAGTCCATGTTCATCTCCTCGAAACGAGCACGCGTGATCTGGCTGTT--G 102155 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || || | || ||| | | ||||| || |||||| | | || | | ||| | Sbjct 102156 AAGTCGATTCCCTCGAACAGAGAATCGATCTCAATGCTAGCCTGCGTGCTGCTAGACAGA 102215 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| || ||||| || || || || | |||||| || |||||| | ||| Sbjct 102216 GTGCGCTTAGCACGCTCGCAAGCAGTACGCAGACGACGCAGAGCACGCTGCGAGGTCGAA 102275 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCT-TCAGAGAAGTG-TCGA--AGGAGTCTCGA 7455 || || || | || || || ||||| ||| ||||| || | | | | | Sbjct 102276 ATGTCCTTGTGGAACTTGCGCTTGAACTCCGTCAT-GAAGTACTCCACCATGCGGTT--- 102331 Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| ||||| |||||||| ||||| || || ||||| || || || || || || Sbjct 102332 ATCGAAATCCTCACCTCCCAAGTGAGTATCTCCAGCAGTCGCCTTCACCTCGAAAATTCC 102391 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | || || | || ||| ||||| || |||||||||||||| || ||||| || | Sbjct 102392 GTCCTCGATCGACAGCAGCGACACATCGAAGGTACCACCACCCAGATCGAAAATCAGAAT 102451 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 |||| | ||| | | || || || |||||||| || ||||| || || || || || Sbjct 102452 GTTCTTCTCGCCTCCCTT---CTGGTCCAGACCGTAAGCAATAGCAGCGGCAGTGGGCTC 102508 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || |||||||| | |||||| |||||||| ||| | ||||| ||||| || || || Sbjct 102509 GTTGATAATACGCATCACGTTCAGTCCAGCAATCGTTCCAGCATCCTTCGTAGCCTGACG 102568 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||||||||||| ||||| || || || || | || |||| | | || | ||| || | Sbjct 102569 CTGCGAATCGTTGAAGTATGCAGGCACAGTAATCACAGCGTTCTTCACCTCCTTGCCCAA 102628 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 ||| || || || || | ||||| || || || |||||||| |||||||| |||| | Sbjct 102629 ATAAGACTCAGCAATCTGCTTCATCTTCGTCAGCACCATCGAAGAAATCTCCTCAGGAGA 102688 Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG 7875 ||||| || | || || || | || || || |||| || || || ||| ||| Sbjct 102689 GAACTGCTTTCTCTCGCCCTTGTACTCCACCTCGATCACAGGCTTGCCCTCAGGACCTCT 102748 Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTG-GTCCGAAAACTTTC 7934 | | | | | ||| | ||||||||| || || | | | ||| ||||| | Sbjct 102749 CTTCAGAGTGAAAGGCCAGTGCTTCATATCG-CTCTGAACAGAGGCGTCGTCGAACTTAC 102807 Query 7935 TTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCT 7994 || || |||||||| || || || || ||||| | |||||||| || ||||||| Sbjct 102808 GACCAATCAGACGCTTCGCGTCGAACACAGTGTTGGTAGGGTTCATAGCCACCTGGTTCT 102867 Query 7995 TCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCG 8054 | || || || || || ||||| || || || || || || || || || || || | Sbjct 102868 TAGCAGCATCACCAATCAGACGCTCTGTA---TCAGTGAAAGCCACATAGGAAGGAGTGG 102924 Query 8055 TTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGC 8114 ||| | || |||||||| |||||||| || || |||||||||||| || || || | Sbjct 102925 TTCTCTGACCCTGGTCGTTGGCAATAATCTCCACCTTGTCGTTTTGCCAAACACCCACAC 102984 Query 8115 ACGAATACGTTGTTCCTAAATCAATACC 8142 | ||||| ||||| || ||||||||||| Sbjct 102985 AAGAATAGGTTGTACCCAAATCAATACC 103012 Score = 349 bits (386), Expect = 4e-91 Identities = 861/1288 (67%), Gaps = 31/1288 (2%) Strand=Plus/Plus Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || |||||||| || ||||| | ||||| || || || | ||||| | | ||| Sbjct 682122 GTCGAGAAGATCTGCGACTTCTTCGTGGGAATGGTGGTGTTACGGGGAATCAGCACCGTC 682181 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || | || || || || || || ||||||||||| | ||| |||| || | |||| Sbjct 682182 ATCACGCCTCCGGCCGTCTCCAGACCCAGAGACAGAGGAGCCACATCCAGCAGCAGCAGG 682241 Query 6989 TCTTGAACAGATTCGTTCCCTTCACC----CGTTAAG-ATGGCGGCTTGGACCGTCGCCC 7043 || | ||| || | |||| || || | || | ||| || || || ||||| | Sbjct 682242 TCGTC--CAGCTTGCTGCCCTGGCCCTTGCCGCTCAGCACGGCCGCCTGCACGGTCGCTC 682299 Query 7044 CGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAAT 7103 |||| || || |||||||||||||| || | | || || || ||||| || | | Sbjct 682300 CGTAAGCCACAGCCTCATCGGGGTTGATGCTCTGGCAAAGCTCCTTGCCGTTGAAGAACT 682359 Query 7104 CCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCAT 7163 || | ||| | || | || || || || | ||||| || |||| || | || | Sbjct 682360 CCTGCAGCATCTTCTGCACCTTGGGAATACGCGAGGATCCTCCCACCAGCACCACCTCGT 682419 Query 7164 TCACTTTCGATTTATCGAT--CTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACA 7221 ||| | | | | |||| ||| | ||| || || || || ||||| || Sbjct 682420 CCACCTG-GCTCT-TCGACAGCTTCGCGTCGCGCAGCACCTTCTCCACAGGAGTGATCGT 682477 Query 7222 TTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAAT--GGATGTATAG 7279 || ||||| |||||||| || ||||| ||||| ||||| || || || ||| | Sbjct 682478 CTTGCGGAAGAAGTCCATGTTCATCTCCTCGAAACGAGCACGCGTGATCTGGCTGTT--G 682535 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || || | || ||| | | ||||| || |||||| | | || | | ||| | Sbjct 682536 AAGTCGATTCCCTCGAACAGAGAATCGATCTCAATGCTAGCCTGCGTGCTGCTAGACAGA 682595 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| || ||||| || || || || | |||||| || |||||| | ||| Sbjct 682596 GTGCGCTTAGCACGCTCGCAAGCAGTACGCAGACGACGCAGAGCACGCTGCGAGGTCGAA 682655 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCT-TCAGAGAAGTG-TCGA--AGGAGTCTCGA 7455 || || || | || || || ||||| ||| ||||| || | | | | | Sbjct 682656 ATGTCCTTGTGGAACTTGCGCTTGAACTCCGTCAT-GAAGTACTCCACCATGCGGTT--- 682711 Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| ||||| |||||||| ||||| || || ||||| || || || || || || Sbjct 682712 ATCGAAATCCTCACCTCCCAAGTGAGTATCTCCAGCAGTCGCCTTCACCTCGAAAATTCC 682771 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | || || | || ||| ||||| || |||||||||||||| || ||||| || | Sbjct 682772 GTCCTCGATCGACAGCAGCGACACATCGAAGGTACCACCACCCAGATCGAAAATCAGAAT 682831 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 |||| | || | | || || || |||||||| || ||||| || || || || || Sbjct 682832 GTTCTTCTCACCTCCCTT---CTGGTCCAGACCGTAAGCAATAGCAGCGGCAGTGGGCTC 682888 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || |||||||| | |||||| |||||||| ||| | ||||| ||||| || || || Sbjct 682889 GTTGATAATACGCATCACGTTCAGTCCAGCAATCGTTCCAGCATCCTTCGTAGCCTGACG 682948 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||||||||||| |||||||| || || || | || || | | | || | ||| || | Sbjct 682949 CTGCGAATCGTTGAAGTAGGCAGGCACAGTAATCACAGCATTCTTCACCTCCTTGCCCAA 683008 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 ||| || || || || | ||||| || || || |||||||| |||||||| |||| | Sbjct 683009 ATAAGACTCAGCAATCTGCTTCATCTTCGTCAGCACCATCGAAGAAATCTCCTCAGGAGA 683068 Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG 7875 ||||| || | || || || | || || || |||| || || || ||| ||| Sbjct 683069 GAACTGCTTTCTCTCGCCCTTGTACTCCACCTCGATCACAGGCTTGCCCTCAGGACCTCT 683128 Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTG-GTCCGAAAACTTTC 7934 | | | | | ||| | ||||||||| || || | | | ||| ||||| | Sbjct 683129 CTTCAGAGTGAAAGGCCAGTGCTTCATATCG-CTCTGAACAGAGGCGTCGTCGAACTTAC 683187 Query 7935 TTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCT 7994 || || |||||||| || || || || ||||| | |||||||| || ||||||| Sbjct 683188 GACCAATCAGACGCTTCGCGTCGAACACAGTGTTGGTAGGGTTCATAGCCACCTGGTTCT 683247 Query 7995 TCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCG 8054 | || || || || || ||||| || || || || || || || || || || || | Sbjct 683248 TAGCAGCATCACCAATCAGACGCTCTGTA---TCAGTGAAAGCCACATAGGAAGGAGTGG 683304 Query 8055 TTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGC 8114 ||| | || |||||||| |||||||| || || |||||||||||| || || || | Sbjct 683305 TTCTCTGACCCTGGTCGTTGGCAATAATCTCCACCTTGTCGTTTTGCCAAACACCCACAC 683364 Query 8115 ACGAATACGTTGTTCCTAAATCAATACC 8142 | ||||| ||||| || ||||||||||| Sbjct 683365 AAGAATAGGTTGTACCCAAATCAATACC 683392 Score = 118 bits (130), Expect = 1e-21 Identities = 362/558 (65%), Gaps = 39/558 (7%) Strand=Plus/Plus Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656 ||| || || ||||| || | || || || || || || || || ||||| ||| ||| Sbjct 403784 CTTGTCCAGTCCGTAAGCCAGGGCTGCTGCTGTCGGCTCGTTGATGATACGCAGAACGTT 403843 Query 7657 CAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGG 7715 |||||| || || | ||| ||||||||||| | ||| || || ||||| || || | Sbjct 403844 CAGGCCTGCGAT-GAGGCCAGCATCTTTCGTTGATTGACGCTGGCTGTCGTTGAAATAAG 403902 Query 7716 CCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT- 7774 | || || || | || |||| || || |||| || ||||| |||| || | ||| Sbjct 403903 CAGGAACGGTGATGATTGCGTTTGTAACCTTCTCGCCTAGATA--ATTCTCCGCTGTCTG 403960 Query 7775 -TTCATTTTGGTAAGAACCATCGATGA-----------------AATCT--CTTCA---- 7810 ||||||||| | |||||||| || || ||||| || || Sbjct 403961 CTTCATTTTGCTTAGAACCATGGAGGAGATTTGTTCTATATCTCAATCTTCCTGCACTTA 404020 Query 7811 ---GCCGC----AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATC 7863 |||| ||| | ||| ||||| || || | | |||| ||| ||||| || || Sbjct 404021 CTTACCGCATGTAAAGTTTTTGGTTTCGCCCATATACTGGACTTGAATGATGGGATTGTC 404080 Query 7864 CGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTC 7923 || ||| | | ||| ||| ||| | || | |||| || || |||||| Sbjct 404081 GTGCTCATCGGCAACCAATTTAAACGGCCAGTGCTTGAGGTCGTTCTGAACAATTTGGTC 404140 Query 7924 CGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGC 7983 ||||| | |||||| || || ||||| ||||| || ||||||| |||||| | | Sbjct 404141 ATGGAACTTGCGTCCGATGAGTCGTTTTGCGTCAAACACGGTGTTTTGAGGGTTCGTCGT 404200 Query 7984 TGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTA 8043 |||| ||||| || || || || || || | | |||| || || || ||| Sbjct 404201 GATTTGAGCTTTCGCTGCCTCTCCAATCAGTCG---GTGAGTTTCTGTGAAGGCAACGAC 404257 Query 8044 CGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCA 8103 || || || || ||||| || ||||| | |||||| || || | ||| | || ||| Sbjct 404258 GGAAGGAGTTGTCCGATTTCCCATATCGTTAGGAATAATCTCCACTCTGTCATCTTTCCA 404317 Query 8104 GACGCCGACGCACGAATA 8121 || |||||||| ||||| Sbjct 404318 TACTCCGACGCAGGAATA 404335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132371285360