Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastocystis_20hominis_20[genbank_20GCA_5F000151665.1_202010-07-06] 54 sequences; 18,817,245 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq46 95.1 2e-14 >seq46 Length=953317 Score = 95.1 bits (104), Expect = 2e-14 Identities = 130/179 (73%), Gaps = 2/179 (1%) Strand=Plus/Minus Query 176890 GGCATCACGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACC 176949 |||||| ||||||||| | |||||| ||||| ||||| || |||| || ||||| Sbjct 565715 GGCATCGCGAACATTCATCACCTTCCCCTTCAGAGGAAAGACTCCATAGTTGTCACGACC 565656 Query 176950 AACCACAGAGAGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAG 177009 || || | || | || ||||||| ||| || ||||| |||||||| | ||| || Sbjct 565655 CACAACGCCCAATCCGCCCACAGCGAGCGCTTTTGCCGAATCTCCCTCTGTGATGATCAG 565596 Query 177010 TGTACACTTG-CCAGATTGTGCCGTACCCGCCTTGTTCGCATCATCCAATTTGGGAATA 177067 || | |||| || |||| ||| || || || || ||||||||||| ||||||||| Sbjct 565595 AGT-CGCTTGGCCCGATTTCTTCGTTCCTGCGTTATTGGCATCATCCAACTTGGGAATA 565538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741980998880