Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastocystis_20hominis_20[genbank_20GCA_5F000151665.1_202010-07-06] 54 sequences; 18,817,245 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq46 84.2 3e-11 >seq46 Length=953317 Score = 84.2 bits (92), Expect = 3e-11 Identities = 127/178 (71%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 169341 GCGTCGCGGACATTCTTACACTTCCCACGGAGAGGAAAGACGCCATAGTGATCACGTCCA 169400 || ||||| |||||| | |||||| ||||||||||| ||||||| ||||| || Sbjct 565714 GCATCGCGAACATTCATCACCTTCCCCTTCAGAGGAAAGACTCCATAGTTGTCACGACCC 565655 Query 169401 ACGACGGAGAGACCCGCGACCGCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGG 169460 || ||| | || | || || || | ||| || ||||| ||||| |||| || || Sbjct 565654 ACAACGCCCAATCCGCCCACAGCGAGCGCTTTTGCCGAATCTCCCTCTGTGATGATCAGA 565595 Query 169461 GTACACTTT-CCAGATTGCGCCGTACCCGCCTTGTTTGCGTCGTCCAACTTGGGAATA 169517 || | ||| || |||| | ||| || || || || || || ||||||||||||||| Sbjct 565594 GT-CGCTTGGCCCGATTTCTTCGTTCCTGCGTTATTGGCATCATCCAACTTGGGAATA 565538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980401762960