Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastocystis_20hominis_20[genbank_20GCA_5F000151665.1_202010-07-06] 54 sequences; 18,817,245 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq2 102 6e-17 >seq2 Length=1866585 Score = 102 bits (112), Expect = 6e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || || ||||| ||||| ||||| ||| | || | || || | |||||| || ||||| Sbjct 484763 TCCTTCTGAATGTTGTAGTCAGAAAGAGTACGTCCATCCTCGAGCTGCTTTCCAGCAAAG 484822 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 |||| ||||| ||||| | ||||| ||||||||||| |||||| || || Sbjct 484823 ATCAAACGCTGCTGATCTGGGGGAATTCCCTCCTTGTCCTGAATCTTGGCCTTCACGTTC 484882 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | || || | |||||| || | || ||||| ||||| |||||||| ||||| Sbjct 484883 TCGATGGTATCAGAAGACTCCACATCAAGGGTGATCGTCTTTCCAGTCAAAGTCTTTACG 484942 Query 48756 AAAATCTGCAT 48766 ||||| ||||| Sbjct 484943 AAAATTTGCAT 484953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937349295442