Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastocystis_20hominis_20[genbank_20GCA_5F000151665.1_202010-07-06] 54 sequences; 18,817,245 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 3e-15 >seq2 Length=1866585 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||| || ||||| || ||||| || || ||||| || |||||||||||||| || || Sbjct 484869 AAGATTCAGGACAAGGAGGGAATTCCCCCAGATCAGCAGCGTTTGATCTTTGCTGGAAAG 484810 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 ||||| |||||| | | | || || || |||||||| ||||||||||| || ||| Sbjct 484809 CAGCTCGAGGATGGACGTACTCTTTCTGACTACAACATTCAGAAGGAATCGACCCTTCAC 484750 Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930 | || | || ||||||| || Sbjct 484749 CTTGTACTTCGTCTGCGCGGTGG 484727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897296319120