Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastocystis_20hominis_20[genbank_20GCA_5F000151665.1_202010-07-06] 54 sequences; 18,817,245 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq46 96.9 4e-15 >seq46 Length=953317 Score = 96.9 bits (106), Expect = 4e-15 Identities = 128/178 (72%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 169327 GGCATCGCGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACC 169386 |||||||||||||||| | |||||| ||||| ||||| || |||| |||||||| Sbjct 565715 GGCATCGCGAACATTCATCACCTTCCCCTTCAGAGGAAAGACTCCATAGTTGTCACGACC 565656 Query 169387 AACGACGGAGAGACCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAG 169446 || ||| | || | || ||||| | || ||||| || ||||| |||| ||| || Sbjct 565655 CACAACGCCCAATCCGCCCACAGCGAGCGCTTTTGCCGAATCTCCCTCTGTGATGATCAG 565596 Query 169447 CGTACATTTTCCAGATTGTGCCGTACCCGCCTTGTTCGCATCATCCAATTTGGGAATA 169504 || || || |||| ||| || || || || ||||||||||| ||||||||| Sbjct 565595 AGTCGCTTGGCCCGATTTCTTCGTTCCTGCGTTATTGGCATCATCCAACTTGGGAATA 565538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260406298960