Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastocystis_20hominis_20[genbank_20GCA_5F000151665.1_202010-07-06] 54 sequences; 18,817,245 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq51 116 9e-21 >seq51 Length=900598 Score = 116 bits (128), Expect = 9e-21 Identities = 156/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || || |||||||| ||||| || ||||||||||| || | | ||| | || || Sbjct 383016 GAGCACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCGTC 382957 Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 || || ||||| || ||||| || || | |||||| || | | ||||| ||||| Sbjct 382956 CTCGAGCTGCTTT--CCAGCGAAAATCAGACGCTGCTGATCTGGGGGAATTCCCTCCTTA 382899 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 || ||||| || || || |||| | | |||| ||| ||| || |||||||| || Sbjct 382898 TCCTGAATCTTGGCCTTCACGTTCTCGATGGTGTCCGAAGACTCGACATCAAGAGTGATG 382839 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||||||||| ||||||| ||||| Sbjct 382838 GTCTTTCCAGTGAGAGTCTTAACGAAGATTTGCAT 382804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820001700234