Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_002670.1 Length=14510 Score E Sequences producing significant alignments: (Bits) Value seq318 82.4 7e-12 seq60 78.8 9e-11 >seq318 Length=132058 Score = 82.4 bits (90), Expect = 7e-12 Identities = 62/71 (87%), Gaps = 3/71 (4%) Strand=Plus/Plus Query 13143 TGGCGGAATTGGCAGACGCTGCGGACTTAAAATCCGTTG--GTTATTAAACCGTGAGGGT 13200 |||||||||||| |||||| |||||||||||||||||| ||||| | ||||||||| Sbjct 17435 TGGCGGAATTGGTAGACGCAACGGACTTAAAATCCGTTGATCTTATT-GATCGTGAGGGT 17493 Query 13201 TCAAGTCCCTC 13211 ||||||||||| Sbjct 17494 TCAAGTCCCTC 17504 >seq60 Length=599436 Score = 78.8 bits (86), Expect = 9e-11 Identities = 61/70 (87%), Gaps = 2/70 (3%) Strand=Plus/Plus Query 13143 TGGCGGAATTGGCAGACGCTGCGGACTTAAAATCCGTTGGT-TATTAAACCGTGAGGGTT 13201 ||||||||| || |||||| |||||||||||||||||| | ||| || |||||||||| Sbjct 98776 TGGCGGAAT-GGTAGACGCAACGGACTTAAAATCCGTTGATATATATAATCGTGAGGGTT 98834 Query 13202 CAAGTCCCTC 13211 |||||||||| Sbjct 98835 CAAGTCCCTC 98844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 46313208013268