Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_002671.1 Length=15179 Score E Sequences producing significant alignments: (Bits) Value seq5 118 1e-22 >seq5 Length=3486096 Score = 118 bits (130), Expect = 1e-22 Identities = 138/183 (75%), Gaps = 5/183 (3%) Strand=Plus/Plus Query 14506 AGGAAATAAATATTATGGCAAATGGAACAGTAAAATGGTTTAACGCAGATAAAGGATTTG 14565 |||||||| ||||| | || |||||||| |||||||||||||||||||| | | Sbjct 3468303 AGGAAATAGGATTTATGAGTACCGGTACAGTAAAGTGGTTTAACGCAGATAAAGGCTACG 3468362 Query 14566 GCTTTATCACTTCAGAAGA---AGGCAAAGATTTGTTCGCTCACTTCTCAGCAATCCA-A 14621 ||||||| ||| ||||||| ||||||||| |||||| ||| ||||| ||| | Sbjct 3468363 GCTTTATTACTCCAGAAGATGGCGGCAAAGATCTGTTCGTACACCACTCAGAAATTAAGG 3468422 Query 14622 TCTGATGGATTCAAATCACTTGATGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGT 14681 ||| ||| | | ||||| |||| || |||||||| |||||||| |||| |||||| Sbjct 3468423 TCT-CTGGTTACGCGACACTTAATGACGGACAAAAAGTAGAATTTGAAGTTGGAGAAGGC 3468481 Query 14682 CAA 14684 ||| Sbjct 3468482 CAA 3468484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 48453989894072