Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1 228 7e-55 seq36 141 8e-29 seq53 127 2e-24 seq63 123 2e-23 seq115 113 4e-20 seq337 98.7 9e-16 seq10 93.3 4e-14 >seq1 Length=7344524 Score = 228 bits (252), Expect = 7e-55 Identities = 948/1473 (64%), Gaps = 43/1473 (3%) Strand=Plus/Minus Query 22111 CACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCGTCTT 22170 ||||||||||| || | ||| | || | ||| | || || || |||||||| || || Sbjct 2686744 CACTGTAAACTTAATTGGGTTCACAGCTGCTTTACTACGCAGGTAGTACATGCCTGTTTT 2686685 Query 22171 CAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGCAAGTC 22230 || || || ||| ||||| || || ||||||| || || ||| | | || || Sbjct 2686684 GAGGCCTTGCTCCCAGGCGTAGAAGTGCATCGACGACAGCTTGCCAAAGGTTGG---GTT 2686628 Query 22231 CATGTACACA----TTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCA 22286 | |||||| | || | ||| |||||| ||| | || || || ||||| |||| Sbjct 2686627 C-TGTACAAAGAGGTTCATACTCTGGCTCTGACAGATGTATGCACCCCGGTCGGCAGCCA 2686569 Query 22287 TATTTATCAATGTACGCATCGAC--ATTTCCCATACGGTCTTGTACAGTTGCCTGATCTC 22344 ||| || |||| |||| | | ||||||||||| ||||||||||| | | | | || Sbjct 2686568 TATCGAT-AATG-ACGCGCTGGCTGATTTCCCATACCGTCTTGTACAGATCCTTTAATTC 2686511 Query 22345 TAACGG--TATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTA 22402 | || ||||| || | ||||| | || ||||| | || | | || Sbjct 2686510 TTGAGGAATATCG--TCAAAGCTCTGAATCGAACCGTTGGCGGCCATCAGGCGGTGCTTC 2686453 Query 22403 ATCGTATCGTTCCACAAACCGATGGCGGT-CAAATCTTTGACCAGATGACGGTTCACCAC 22461 || ||||||||||| || | | |||| |||||| | ||| || |||||| | Sbjct 2686452 ATATCGTCGTTCCACAAGCCCA-GACGGTTCAAATCGCGCAGCAGGTGCTTGTTCACGAT 2686394 Query 22462 TTGAAACTCGCCGGACAAGACG--CGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAA 22519 | || || || || ||| || ||||| ||| || ||| ||| | || |||||| Sbjct 2686393 TACGAATTCACCAGA-AAG-CGTACGGCGGCTGTAGATATTGCTGGTGTATGGCTCGAAA 2686336 Query 22520 GATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGC 22579 |||| ||||| ||||| ||||||| ||| ||||| || ||||| ||||| | ||| | Sbjct 2686335 CATTCGTTGTTGCCCAGGATCTGAGAGGTAGAAGCAGTTGGCATTGGCGCTACCAGCAAG 2686276 Query 22580 GAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCG 22639 ||| | || ||| | ||| ||| | |||| ||| | ||| ||||| | ||| Sbjct 2686275 CTGTTGCGCAGGCCATTCTTCTTAATGTCCTTCTTCAGCTCGGCCCAATCCCAACGTTCG 2686216 Query 22640 GACGGCGTCACATTGTCCCACATATCGTATTGCA--ACACGCCGCGACTCGCCGGGCTGC 22697 ||||||||| |||||||||| || |||| |||| || || || || || || Sbjct 2686215 CTTGGCGTCACAC---CCCACATATCATACTGCAGTACAC-CCTCG-CTGGCTGGTGAGC 2686161 Query 22698 CTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGC 22757 | | || | ||||| | ||| | ||| || | ||||| || || || Sbjct 2686160 CCTTATAACTCTCGTAAGTACCTTGCTCTTTGGCCAGGGCACAGCTTTCCGTCAGGGCCG 2686101 Query 22758 CGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCG-GCGGCGACGCTTTCGTAC 22816 | || || || ||||| || || | |||||||||| |||| || | |||| || | Sbjct 2686100 CATAGTAGATGGTCTCAAAAATGTCTTTGTTCAATT-GGCGTGCCTCCTCGCTATCAAAT 2686042 Query 22817 GGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGG 22876 || ||||||| | ||| || ||||||| |||||| || || | |||||| || || Sbjct 2686041 GGGTAGCGCATCAAAATGAAGGCATCCGCCAAACCCTGTACACCCAAACCGATTGGGCGA 2685982 Query 22877 TTTTTCAGATTCGACACTTT--TGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTC 22934 | || ||| || || |||||| | ||| || | || |||||| Sbjct 2685981 TGACGCATATT--ACTATTGCGTGCCTCCTCAATAGGGTAGTAGTTGATATCGATAACCT 2685924 Query 22935 TGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGC 22994 |||||| ||| | |||||| || |||| |||||||||||| || Sbjct 2685923 TGTTCAGGTTGCGGGTCACGATACGGGTTACTTCGTACAGGCGCTCAAAGTCGTAAGTGC 2685864 Query 22995 CCGATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGT 23054 | || | || | || | || | || || || ||||| || || || | Sbjct 2685863 CGTCTTCTTTTACGTATTTACCCAGTGCCAAACTCGCGAGGTTACATACCGCTACTTCAT 2685804 Query 23055 CTTTGGACGTGTACTCTACAATTTCGGTACATAGATT---GCTACACTTTATCGTGCCCA 23111 | | |||||||| | || |||||||| || || ||| | || || |||| Sbjct 2685803 CAGGTGCAGTGTACTCGATGATCTCGGTACAAAGGTTTGAGCTGCGG---ATGGTACCCA 2685747 Query 23112 AATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCG 23171 || ||||||||| || || ||| || ||||||||| || || ||||| || || | Sbjct 2685746 GGTTCTGCTGGTTGCTCTTGCGGTTGGCCGCATCCTTGTAAAGGATATACGGTGTACCGG 2685687 Query 23172 TCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAAC-ACGTCGCACG 23230 | |||| ||| || | || || ||||| | || || | || || | || | Sbjct 2685686 TTTCGATCTGGCTTTCCAAAATAGCGAACCACAAATCTTGTGCTTTTACCACTTTGCGGG 2685627 Query 23231 TACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCG 23290 || ||| || | |||||||| || || | || || || ||| ||| || ||| Sbjct 2685626 CACGACCCTCCTGC-TCGTACTTATGATAGAGTGCTTCGAACTCGCCACTGTGTACGTCA 2685568 Query 23291 GCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGT 23350 ||| || | || ||||| | || ||| || | || ||||| Sbjct 2685567 AACAGATTCGGTGCTTCATTCGGATCGAACAGCGACCAGTCGCCGTTTTCTTTCACGCGG 2685508 Query 23351 CTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCT 23410 | ||| || | |||||| ||||| | ||||||||||| || || ||||||| ||| || Sbjct 2685507 CGCATGAACAAATCCGGAATCCACATAGCGTAGAACAAGTCACGAGCGCGCAACTCTTCC 2685448 Query 23411 TTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGG 23470 || ||| ||| || |||| |||| ||||| || || || || ||||| ||||| ||| Sbjct 2685447 TTACCGTGGTTTTTCTTCAGTTCCAGGAAGTCGAATACATCTGCGTGCCAGGGCTCCAGG 2685388 Query 23471 TAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTG 23530 |||| || || || || | |||| || ||||| || ||||| ||||| |||| | Sbjct 2685387 TAAATAGCGAAGGCACCTTTACGCTTACCACCACCCTGGTCAACGTAGCGGGCAGTGTCG 2685328 Query 23531 TTGTACACTCTTAGCATCGGCACGAGACCGTTG 23563 ||| | ||| | | |||||| || | ||||||| Sbjct 2685327 TTGAATACTTTCAACATCGGTACAATACCGTTG 2685295 >seq36 Length=729648 Score = 141 bits (156), Expect = 8e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || |||||| | ||||| || || || Sbjct 221822 CATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTGGACGTGGAGCCCTC 221881 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| || || |||| || ||||||||| || | ||||| || || Sbjct 221882 GGACACGATCGACGGCGTGAAGCAGAAGATCCAGGACAAGGAGGGTATCCCGCCTGATCA 221941 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| ||||| ||| |||| ||| ||| ||||||| || || Sbjct 221942 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACTCTGAGCGACTACAA 222001 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || ||||| |||||||| || || || ||| | ||| | ||||| Sbjct 222002 CATCCAGAAAGAGTCGACTCTCCACCTTGTTCTTCGCCTGCGCGGCGG 222049 Score = 111 bits (122), Expect = 1e-19 Identities = 138/189 (73%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || |||||| | ||||| || || || Sbjct 220349 CATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTGGACGTGGAGCCCTC 220408 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| || || |||| || ||||||||| ||| | ||||| || || Sbjct 220409 GGACACGATCGACGGCGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCGCCTGATCA 220468 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| ||||| ||| |||| ||| || ||||||| || || Sbjct 220469 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTGAGCGACTACAA 220528 Query 31372 CATTCAAAA 31380 ||| || || Sbjct 220529 CATCCAGAA 220537 Score = 109 bits (120), Expect = 5e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 31196 CAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGAC 31255 || |||||||| |||||||| || ||||| || |||||| | || || || || || ||| Sbjct 219880 CAGATTTTCGTCAAGACTCTCACGGGCAAGACCATCACCCTAGATGTCGAGCCCTCGGAC 219939 Query 31256 AGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAG 31315 | |||| || || || | ||| ||||||||| ||| | || || ||||||||| Sbjct 219940 ACGATCGACGGCGTGAAGCAAAAAATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAG 219999 Query 31316 CGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATT 31375 ||||| || || || ||||| ||| |||| ||| ||| ||||||| || ||||| Sbjct 220000 CGTCTGATCTTTGCCGGCAAGCAGCTGGAGGACGGCCGCACTCTGAGCGACTACAACATC 220059 Query 31376 CAAAA 31380 || || Sbjct 220060 CAGAA 220064 Score = 107 bits (118), Expect = 2e-18 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || |||||| | ||||| || || || Sbjct 220838 CATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTGGACGTGGAGCCCTC 220897 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| || || |||| || ||||||||| ||| | ||||| || || Sbjct 220898 GGACACGATCGACGGCGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCGCCTGATCA 220957 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || || || ||||| ||| |||| ||| || ||||||| || || Sbjct 220958 GCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTGAGCGACTACAA 221017 Query 31372 CATTCAAAA 31380 ||| || || Sbjct 221018 CATCCAGAA 221026 Score = 107 bits (118), Expect = 2e-18 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || |||||| | ||||| || || || Sbjct 221330 CATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTGGACGTGGAGCCCTC 221389 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| || || |||| || ||||||||| ||| | ||||| || || Sbjct 221390 GGACACGATCGACGGCGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCGCCTGATCA 221449 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || || || ||||| ||| |||| ||| || ||||||| || || Sbjct 221450 GCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTGAGCGACTACAA 221509 Query 31372 CATTCAAAA 31380 ||| || || Sbjct 221510 CATCCAGAA 221518 >seq53 Length=625924 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| ||||| || || ||||| || ||||| ||||||| || || || Sbjct 125624 CATGCAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACGCTCGACGTGGAGCCCTC 125565 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| || || |||| || ||||||||| ||| | || || ||||| Sbjct 125564 GGACACGATCGACGGCGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCA 125505 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||| ||||| ||| |||| ||| || | ||||| || || Sbjct 125504 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTCAGCGACTACAA 125445 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || || ||||| || || || || || |||||| | || || Sbjct 125444 CATCCAGAAGGAGTCGACGCTCCACCTCGTGCTGAGACTGCGCGGTGG 125397 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || ||||| ||||||| || || || Sbjct 125168 CATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACGCTCGACGTGGAGCCCTC 125109 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| || || |||| || ||||||||| ||| | || || ||||| Sbjct 125108 GGACACGATCGACGGCGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCA 125049 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||| ||||| ||| |||| ||| || | ||||| || || Sbjct 125048 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTCAGCGACTACAA 124989 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || || ||||| || || || || || |||||| | || || Sbjct 124988 CATCCAGAAGGAGTCGACGCTCCACCTCGTGCTGAGACTGCGCGGTGG 124941 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || ||||| ||||||| || || || Sbjct 125396 CATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACGCTCGACGTGGAGCCCTC 125337 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| || || |||| || ||||||||| ||| | || || ||||| Sbjct 125336 GGACACGATCGACGGCGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCA 125277 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||| ||||| ||| |||| ||| || | ||||| || || Sbjct 125276 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTCAGCGACTACAA 125217 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || || ||||| || || || || || |||||| | || || Sbjct 125216 CATCCAGAAGGAGTCGACGCTCCACCTCGTGCTGAGACTGCGCGGTGG 125169 Score = 120 bits (132), Expect = 3e-22 Identities = 167/233 (72%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || ||||| ||||||| || || || Sbjct 124940 CATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACGCTCGACGTGGAGCCCTC 124881 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| || || |||| || ||||||||| ||| | || || ||||| Sbjct 124880 GGACACGATCGACGGCGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCA 124821 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||| ||||| ||| |||| ||| || | ||||| || || Sbjct 124820 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTCAGCGACTACAA 124761 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAG-GGGCGGTAGA 31423 ||| || || || ||||| || || || || || || ||| | ||| | |||| Sbjct 124760 CATCCAGAAGGAGTCGACGCTCCACCTCGTGCTGAGGCTGCGCGGGGGCTAGA 124708 Score = 102 bits (112), Expect = 7e-17 Identities = 115/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 31195 GCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGA 31254 ||| |||||||| ||||| || || ||||| || ||||| ||||||| || || || || Sbjct 126280 GCAGATTTTCGTGAAGACCCTTACGGGCAAGACCATCACGCTCGACGTGGAGCCCTCGGA 126221 Query 31255 CAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCA 31314 || |||| || || |||| || ||||||||| ||| | || || |||||||| Sbjct 126220 CACGATCGACGGCGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCA 126161 Query 31315 GCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 ||| || || ||||| ||||| ||| |||| ||| Sbjct 126160 GCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAC 126127 >seq63 Length=566113 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || || || || ||||| | ||||| ||||| || Sbjct 329048 CATGCAGATCTTCGTCAAGACCCTCACGGGAAAGACCATCACGCTTGACGTAGAACCCTC 328989 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| || || | || || ||||||||| ||| | || || ||||| Sbjct 328988 CGACACGATCGACGGCGTGAAGCCGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCA 328929 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || |||||||| || ||| |||| ||| || ||||||| || || Sbjct 328928 GCAGCGCCTGATCTTCGCTGGAAAGCAGCTGGAGGACGGCCGCACCCTGAGCGACTACAA 328869 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || || |||||||| || || || || || ||| | || || Sbjct 328868 CATCCAGAAGGAGTCGACTCTCCACCTTGTGCTGAGGCTGCGTGGTGG 328821 Score = 87.8 bits (96), Expect = 2e-12 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 31195 GCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGA 31254 ||| || || || |||||||| || ||||| || ||||| | ||||| || || || || Sbjct 329628 GCAGATCTTTGTCAAGACTCTCACGGGCAAGACCGTCACCCTTGACGTGGAGCCCTCGGA 329569 Query 31255 CAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCA 31314 || |||| || || || | || ||||||||| ||| | || || |||||||| Sbjct 329568 CACGATCGACGGCGTGAAGCATAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCA 329509 Query 31315 GCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACAT 31374 ||| || || ||||| || || ||| |||| ||| || ||||||| || || || Sbjct 329508 GCGCCTGATCTTCGCCGGAAAGCAGCTGGAGGACGGCCGCACCCTGAGCGACTACAATAT 329449 Query 31375 TCAAAA 31380 ||||| Sbjct 329448 CCAAAA 329443 >seq115 Length=378902 Score = 113 bits (124), Expect = 4e-20 Identities = 246/363 (68%), Gaps = 4/363 (1%) Strand=Plus/Plus Query 57771 GAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTAT 57830 |||||| | ||||| ||||| || || | ||||| || ||| | || || |||| Sbjct 238112 GAGGCGCGGTGCTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACAGCGAGGTGTAC 238171 Query 57831 TCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCG 57890 || || ||||| || ||||| |||||| |||||| ||||||||||| Sbjct 238172 AGTCTGCTGATCGACACCTACGTCAAGGACGCGTCCGAGAAGGCCCACCTGTTCAACGCC 238231 Query 57891 ATCGAAACAATGCCC-GCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAG 57949 || || || |||| ||| || | |||||| |||| | | ||| || Sbjct 238232 ATGGAGACCGTGCCTTGCGTGCGA-AGGAAGGCGAGGTGGGCGCTGCGGTGGTGCAACCC 238290 Query 57950 CGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTT 58009 | | ||| | ||||| ||| |||| | |||||||| ||||| || || || ||||| Sbjct 238291 GGACCTGGCGTCCTTCGCGGAGCGGCTCGTTGCGTTCGCGGCCGTGGAGGGCATCTTCTT 238350 Query 58010 TTCGGGCAGCTT-TGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGA 58068 || |||||||| |||| | | || ||| | || || ||||||||||||||||||||| Sbjct 238351 CTCCGGCAGCTTCTGCGCCG-TCTTCTGGCTCAAAAAGCGCGGCCTGATGCCCGGCCTGT 238409 Query 58069 CGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAA 58128 || |||||| | || ||||||||||| || || || || || || |||||| Sbjct 238410 GCTTCTCGAACGAGCTCATCAGCCGCGACGAGGGCCTGCACACCGACTTCGCTTGCCTAC 238469 Query 58129 TGT 58131 ||| Sbjct 238470 TGT 238472 >seq337 Length=117279 Score = 98.7 bits (108), Expect = 9e-16 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 23660 TGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACAC 23719 || || || |||||||| || || | |||||||||||| || | | || || ||| || Sbjct 20479 TGCTTGAGCGTGTCGTATATCCCGTTGATGCTGTCCTCCTTCATGGTGAGCAGGAAGCAG 20420 Query 23720 GAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAG 23779 ||||| |||| |||||||| |||| |||||| ||||| | |||||||| ||| Sbjct 20419 CTGGACATCTGCGGCTTGGGCGTGCCGGCGTTGAACAGCGTCGGTGTTGCGTGCGTGAAG 20360 Query 23780 TATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATA 23839 | | |||||| || | |||||| ||||| | || ||||| || ||| || Sbjct 20359 AGCCTCTGCGACATGAGGTCGTACGTCTCGATCACCTTGTCGATGTCGTCCTTGTGGATG 20300 Query 23840 CCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACC 23881 || | | |||||||| ||||||| || || || || ||| Sbjct 20299 CCCACCGACACGCGCATGATCATGTGCTGCGGCCTTTCCACC 20258 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 22523 TCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAG 22582 |||||||| ||||| || || |||||||| ||||||||||||||||||| || |||||| Sbjct 24824 TCATTGTTGCCCAGGATTTGCGCGGTCGACGCGGTCGGCATCGGCGCCACGAGCAGCGAG 24765 Query 22583 TTTCTCAAGCCGTGCT 22598 || || | |||||||| Sbjct 24764 TTCCTGAGGCCGTGCT 24749 Score = 87.8 bits (96), Expect = 2e-12 Identities = 131/185 (71%), Gaps = 6/185 (3%) Strand=Plus/Minus Query 22104 TCTTGTCCACTGTAAACTGTATGGCGTTTGCGGCC---GGTTTGGTGCGAAGATAATACA 22160 ||| ||| || || ||||| || |||| ||||| || |||||||| || |||| Sbjct 25807 TCTGGTCGACGGTGAACTGAATCGCGT---CGGCCTTGGGGCGCGTGCGAAGGTAGTACA 25751 Query 22161 TGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAAC 22220 |||||||||| || ||| ||||||| |||||||| || ||||||| || || || | Sbjct 25750 TGCCCGTCTTGAGGCCCTTCTTCCAGGCGTAAAAGTGCATCGACGACAGCTTGCCGAACG 25691 Query 22221 TCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGG 22280 || | |||||| ||| || | ||||| ||| ||| |||| ||||| |||| Sbjct 25690 ACGCCTCCGCCATGTGCACGTTCATGGACTGGGACTGGCAGATGTACGCCCCTCGGTCGG 25631 Query 22281 CGGCC 22285 | ||| Sbjct 25630 CCGCC 25626 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 23047 CACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGT 23106 ||||||||| | |||||||| || || || || || || || | |||| || || Sbjct 22928 CACCTCGTCGGGCGCGGTGTACTCGACGATCTCCGTGCAGAGGTTAGAAGACTTGATGGT 22869 Query 23107 GCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGT 23166 ||||| || |||||||||| || ||||||| ||||| || ||||||||||| || Sbjct 22868 GCCCAGGTTCTTCTGGTTGCTCTTGAAGTTGCACGCGTCCTTATACAGCATGTACGGGGT 22809 Query 23167 GCCCGTCTCGACCT 23180 ||| || ||||||| Sbjct 22808 GCCGGTTTCGACCT 22795 >seq10 Length=1322232 Score = 93.3 bits (102), Expect = 4e-14 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 22101 CGGTCTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACA 22160 |||||| || || || |||||||| |||| || ||| |||||||| || || |||| Sbjct 364179 CGGTCTGATCGACGGTGAACTGTATCGCGTGGGCCTTCGGCTTGGTGCGGAGGTAGTACA 364120 Query 22161 TGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGT 22206 |||||||||| || ||| ||||||||| ||| || || |||||||| Sbjct 364119 TGCCCGTCTTGAGGCCCTTCTTCCACGAGTAGAAGTGCATCGACGT 364074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445762321237440