Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_003356.1 Length=42575 Score E Sequences producing significant alignments: (Bits) Value seq493 104 6e-18 >seq493 Length=52014 Score = 104 bits (114), Expect = 6e-18 Identities = 75/87 (86%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 42257 CACGTCGTATGCAAGAACGTACCGCGGCTGGCTGGATAACTTTCGATAGTGCGAGTATTG 42316 ||||||||||||| |||||| | |||||||||||| ||||| |||||||||| || ||| Sbjct 39899 CACGTCGTATGCAGGAACGTGCTGCGGCTGGCTGGTGAACTTCCGATAGTGCGGGTGTTG 39958 Query 42317 AATGATTTCCAGCCGTTATCGATTTTA 42343 |||||||||||| | || |||||||| Sbjct 39959 AATGATTTCCAGTTGCTACCGATTTTA 39985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136117216790808