Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 9e-15 >seq1 Length=7344524 Score = 95.1 bits (104), Expect = 9e-15 Identities = 117/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800 || ||| | |||||||| || || || || || | |||||||| || || | || Sbjct 2683914 CGCCTCATCGCCTTTGCAGCAGTGGAGGGTATCTTCTTTTCTGGTTCGTTCTGTTCGATC 2683973 Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860 |||||| ||||||| ||| | ||||| || || || || || |||||||| ||| Sbjct 2683974 TTCTGGTTGAAGAAGCGTGGTTTGATGCCGGGTCTGAGCTTCTCTAATGAGTTGATCAGC 2684033 Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGT 22900 ||||| || ||| | |||||||||||||| ||| |||||| Sbjct 2684034 CGTGATGAGGGTATGCACTGTGACTTTGCCTGTTTGCTGT 2684073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356230421950996