Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_004775.1 Length=39671 Score E Sequences producing significant alignments: (Bits) Value seq493 150 5e-32 >seq493 Length=52014 Score = 150 bits (166), Expect = 5e-32 Identities = 100/111 (90%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 37310 CTGCTGGATGAGCTGGATAAAAAACAGCAATACATCAAACTCCGCGACCAGGAGAACGAG 37369 ||||||||||| | ||| | ||| |||||||||||||||| ||||||||||||||||||| Sbjct 48244 CTGCTGGATGAACGGGAAAGAAACCAGCAATACATCAAACGCCGCGACCAGGAGAACGAG 48185 Query 37370 GATATTGCGCTAACGGTAGGGAAGCTGCGAGTTGAGCTGGAAGCAGCAAAA 37420 |||||||||||||| |||||||| ||||| |||||||| ||| |||||||| Sbjct 48184 GATATTGCGCTAACAGTAGGGAAACTGCGTGTTGAGCTTGAAACAGCAAAA 48134 Score = 150 bits (166), Expect = 5e-32 Identities = 100/111 (90%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 37310 CTGCTGGATGAGCTGGATAAAAAACAGCAATACATCAAACTCCGCGACCAGGAGAACGAG 37369 ||||||||||| | ||| | ||| |||||||||||||||| ||||||||||||||||||| Sbjct 51024 CTGCTGGATGAACGGGAAAGAAACCAGCAATACATCAAACGCCGCGACCAGGAGAACGAG 50965 Query 37370 GATATTGCGCTAACGGTAGGGAAGCTGCGAGTTGAGCTGGAAGCAGCAAAA 37420 |||||||||||||| |||||||| ||||| |||||||| ||| |||||||| Sbjct 50964 GATATTGCGCTAACAGTAGGGAAACTGCGTGTTGAGCTTGAAACAGCAAAA 50914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126824497568472