Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_007710.1 Length=46643 Score E Sequences producing significant alignments: (Bits) Value seq6 109 2e-19 >seq6 Length=3173221 Score = 109 bits (120), Expect = 2e-19 Identities = 213/313 (68%), Gaps = 4/313 (1%) Strand=Plus/Plus Query 35495 TATGCCACCGAAGCCAGTGCAGGCATGGACCTGCGTGCCGCACTGGAGGCGCCGATGACG 35554 ||||||||||||| | || ||| | || ||| | ||| ||||| | |||| |||| Sbjct 938190 TATGCCACCGAAGGCTCCGCCGGCCTTGATCTGAGAGCCTGCCTGGATGAGCCGCTGACC 938249 Query 35555 TTGCAGCCGGGCGATGCGGCGCTGATTCCCAGCGGCATCGCGATCCATCTGGCCGACCCG 35614 || ||||||||||| | ||||| | | |||| | ||||||| | || || || Sbjct 938250 CTGGAGCCGGGCGATACCCAACTGATCCGGACCGGCTTGTCGATCCACATCGCAGATCCT 938309 Query 35615 CAGCTGTGCGCGGTGATCCTGCCGCGCTCGGGGCTTGGCCATCGTCACGGCATCGTACTC 35674 ||| || |||||||||| | ||||| ||||| |||||||| ||||| Sbjct 938310 TCCCTGGCGGCTATGATCCTGCCCAGAAGTGGGCTCGGCCACAAACACGGCATTGTACTT 938369 Query 35675 GGCAA--CGGTACCGGCCTCATCGATGCGGATTACCAGGGGTCGTTGTTGATCAGCACCT 35732 ||||| ||| || | |||||| ||||||||||||| |||| || | | || Sbjct 938370 GGCAATCTGGT--GGGGTTGATCGATTCGGATTACCAGGGCGAGTTGATGGTGTCCTGCT 938427 Query 35733 GGAATCGCGGCCGCGAGGCCTTCACCATCGAGCCGGGCGACCGGATTGCGCAGCTGGTGA 35792 |||| ||||||||| ||| || | || |||||| || | || ||| ||||| Sbjct 938428 GGAACCGCGGCCGCACCAGCTTTACTGTGGATGTGGGCGAGCGCCTGGCCCAGTTGGTGC 938487 Query 35793 TCCTGCCGGTCGT 35805 | |||||||||| Sbjct 938488 TGGTGCCGGTCGT 938500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149134703635320