Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_007804.2 Length=39104 Score E Sequences producing significant alignments: (Bits) Value seq493 307 3e-79 seq6 86.0 2e-12 seq3 86.0 2e-12 seq2 80.6 7e-11 >seq493 Length=52014 Score = 307 bits (340), Expect = 3e-79 Identities = 185/195 (95%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 36589 GTGCTGGCACTGCTGGATGAACAGGAAAGAAACCAGCAATACATCAAACGCCGTGACCAG 36648 ||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct 48253 GTGCTGGAACTGCTGGATGAACGGGAAAGAAACCAGCAATACATCAAACGCCGCGACCAG 48194 Query 36649 GAGAACGAGGATATTGCGCTAACGGTAGGGAAACTGCGTGTTGAGCTTGAGGAAGCAAAA 36708 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 48193 GAGAACGAGGATATTGCGCTAACAGTAGGGAAACTGCGTGTTGAGCTTGAAACAGCAAAA 48134 Query 36709 TCAAAACTCAACGAGCAACGCGAGTATTACGAAGGTGTTATCTCGGATGGGAGTAAGCGT 36768 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct 48133 TCAAAACTCAACGAGCAGCGTGAGTATTACGAAGGTGTTATCTCGGATGGGAGTAAGCGT 48074 Query 36769 ATTGCTGAACTGGAA 36783 |||||| |||||||| Sbjct 48073 ATTGCTAAACTGGAA 48059 Score = 307 bits (340), Expect = 3e-79 Identities = 185/195 (95%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 36589 GTGCTGGCACTGCTGGATGAACAGGAAAGAAACCAGCAATACATCAAACGCCGTGACCAG 36648 ||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct 51033 GTGCTGGAACTGCTGGATGAACGGGAAAGAAACCAGCAATACATCAAACGCCGCGACCAG 50974 Query 36649 GAGAACGAGGATATTGCGCTAACGGTAGGGAAACTGCGTGTTGAGCTTGAGGAAGCAAAA 36708 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 50973 GAGAACGAGGATATTGCGCTAACAGTAGGGAAACTGCGTGTTGAGCTTGAAACAGCAAAA 50914 Query 36709 TCAAAACTCAACGAGCAACGCGAGTATTACGAAGGTGTTATCTCGGATGGGAGTAAGCGT 36768 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct 50913 TCAAAACTCAACGAGCAGCGTGAGTATTACGAAGGTGTTATCTCGGATGGGAGTAAGCGT 50854 Query 36769 ATTGCTGAACTGGAA 36783 |||||| |||||||| Sbjct 50853 ATTGCTAAACTGGAA 50839 >seq6 Length=3173221 Score = 86.0 bits (94), Expect = 2e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 2853 TGGCGTGGCATGCAGGATTCGAACCTGCGACCAACCGCTTAGAAGGCGGTTGCTCTGTCC 2912 ||||| | | |||||| ||||||||||||||| ||||||||||||||| |||||| ||| Sbjct 2219892 TGGCGCGCCCGGCAGGACTCGAACCTGCGACCATCCGCTTAGAAGGCGGATGCTCTATCC 2219833 Query 2913 AACTGAGCTA 2922 | |||||||| Sbjct 2219832 AGCTGAGCTA 2219823 >seq3 Length=4400433 Score = 86.0 bits (94), Expect = 2e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2852 CTGGCGTGGCATGCAGGATTCGAACCTGCGACCAACCGCTTAGAAGGCGGTTGCTCTGTC 2911 |||||| | |||||||||||||||||||||| ||| ||||||| ||| |||||| || Sbjct 3743424 CTGGCGACCCCTGCAGGATTCGAACCTGCGACCGTCCGATTAGAAGTCGGGTGCTCTATC 3743483 Query 2912 CAACTGAGCTAA 2923 |||||||||||| Sbjct 3743484 CAACTGAGCTAA 3743495 >seq2 Length=6328565 Score = 80.6 bits (88), Expect = 7e-11 Identities = 64/77 (83%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 2846 GTGATTCTGGCGTGGCATGCAGGATTCGAACCTGCGACCAACCGCTTAGAAGGCGGTTGC 2905 |||| | ||||| | |||||||||||||||||||||| ||||||||||||| ||| Sbjct 2784474 GTGAATTTGGCGACCCCGGCAGGATTCGAACCTGCGACCATTCGCTTAGAAGGCGAGTGC 2784415 Query 2906 TCTGTCCAACTGAGCTA 2922 ||| |||| |||||||| Sbjct 2784414 TCTATCCAGCTGAGCTA 2784398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125010113340144