Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_007809.1 Length=59446 Score E Sequences producing significant alignments: (Bits) Value seq273 127 8e-25 >seq273 Length=166498 Score = 127 bits (140), Expect = 8e-25 Identities = 135/178 (76%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 35611 CTGTGGGACGCGATCATGCGCGGGACCTGGGATTGGGCGGAGCCGGGCGTGCTGTTCATC 35670 |||||| || ||||||| | ||||| |||| || |||||||| ||| | |||||| Sbjct 146592 CTGTGGAACCGCATCATGCAGGCGACCTATGATTACGCCGAGCCGGGTGTGATCTTCATC 146533 Query 35671 GACGCGATCAACCGCATGAACAACCTCTGGTACTGCGAGACCATCGCCGCCACGAACCCC 35730 ||| ||||||| |||||||| | || ||||| ||||| ||||| || |||||| Sbjct 146532 GACCGCATCAACCAGGCCAACAACCTGAGCTATTGCGAAACCATTGCCGCGACCAACCCC 146473 Query 35731 TGCGGTGAGCAACCGCTCCCGCCCTACGGTGCCTGCTTGTTGGGCTCCTTCAACCTGG 35788 ||||| || || ||||| |||||||| || |||||| | ||||||| ||||| ||| Sbjct 146472 TGCGGGGAACAGCCGCTGCCGCCCTATGGGGCCTGCCTTCTGGGCTCGGTCAACTTGG 146415 Score = 89.7 bits (98), Expect = 2e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 36159 CGAGGACGTGCGGGACGCCATCGCCAAATACGGCATCCGCAACTCCCACCTCACTTCCAT 36218 |||||||||||| | ||| | ||| || | ||||||||||| | | || || ||| | Sbjct 146044 CGAGGACGTGCGCGCAGCCGTGGCCGAACATGGCATCCGCAATGCGCTGCTGACGTCCGT 145985 Query 36219 CGCCCCGACCGGGACCATCAGCCTGTGCGCCGACAACGTCAGCTCCGGGATTGAGCCGGT 36278 || ||||| ||||| || |||| |||| |||||||| |||||||| |||||||| Sbjct 145984 TGCGCCGACGGGGACGATTTCGCTGTATGCCGGGAACGTCAGTTCCGGGATCGAGCCGGT 145925 Query 36279 GTTCGCCTA 36287 || ||||| Sbjct 145924 CTTTGCCTA 145916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190103947507072