Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_008203.1 Length=52047 Score E Sequences producing significant alignments: (Bits) Value seq19 82.4 3e-11 seq4 82.4 3e-11 >seq19 Length=1029424 Score = 82.4 bits (90), Expect = 3e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 4243 GGTCAGTAGCTCAATCGGTAGAGCAGCGGTCTCCAAAGCCGCGCGTTGGAGGTTCGAGTC 4302 || |||||||||||| || |||||||||||||||||| |||| ||||| ||||||| || Sbjct 1022417 GGCCAGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGATTC 1022358 Query 4303 CTCCCTGGCCCGC 4315 | ||||||| || Sbjct 1022357 CCTCCTGGCCTGC 1022345 >seq4 Length=3599618 Score = 82.4 bits (90), Expect = 3e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 4241 CGGGTCAGTAGCTCAATCGGTAGAGCAGCGGTCTCCAAAGCCGCGCGTTGGAGGTTCGAG 4300 || |||||||||||||| ||||||||| ||||||||||| ||| | |||| ||||| || Sbjct 3258224 CGCGTCAGTAGCTCAATTGGTAGAGCATCGGTCTCCAAAACCGAGGGTTGCGGGTTCAAG 3258165 Query 4301 TCCTCCCTGGCCCGCAACTT 4320 ||| |||||| || |||| Sbjct 3258164 TCCCTCCTGGCGTGCCACTT 3258145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166427353317656