Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq115 215 1e-50 seq1 192 1e-43 seq223 147 4e-30 seq9 127 4e-24 seq281 116 7e-21 seq337 100 5e-16 seq10 84.2 4e-11 >seq115 Length=378902 Score = 215 bits (238), Expect = 1e-50 Identities = 341/484 (70%), Gaps = 11/484 (2%) Strand=Plus/Plus Query 42460 AGAACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACG 42519 ||||| |||||| || |||| | ||| | ||| || |||||||| |||||||||| Sbjct 238071 AGAACTTGGCCAGCAACTTCAGCAGCGAGATCCAGCTCTCCGAGGCGCGGTGCTTCTACG 238130 Query 42520 GCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGT 42579 |||||||||| ||||| |||||| | ||| ||||||||| ||| || |||| | Sbjct 238131 GCTTCCAGATCGCCATCGAGAACATCCACAGCGAGGTGTACAGTCTGCTGATCGACACCT 238190 Query 42580 ACATCCTGGATCCCGTC-GAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGC 42638 || || ||| | |||| ||| | |||||||| ||||||||||| |||| ||| Sbjct 238191 ACGTCAAGGA-CGCGTCCGAGAAGGCCCACCTGTTCAACGCCATGGAGACCGTGCCTTGC 238249 Query 42639 ATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGAC---GCAACGTTC 42695 | | ||||||| |||||||| ||| | | || ||| || | ||| Sbjct 238250 GTGCGAAGGAAGGCGAGGTGGGCGCTGCGGTGGTGCAAC---CCGGACCTGGCGTCCTTC 238306 Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755 | ||| |||| || || || | ||||| ||||||||||||||||| ||| |||| | Sbjct 238307 GCGGAGCGGCTCGTTGCGTTCGCGGCCGTGGAGGGCATCTTCTTCTCCGGCAGCTTCTGC 238366 Query 42756 TCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTC 42815 || ||||||||||||| || | ||||||||| || |||||||||||| ||| Sbjct 238367 GCCGTCTTCTGGCTCAAAAAGCGCGGCCTGATGCCCGGCCTGTGCTTCTCGAACGAGCTC 238426 Query 42816 ATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC 42875 |||||| | |||||||| ||||| | ||||| || ||||| |||||| | | || Sbjct 238427 ATCAGCCGCGACGAGGGCCTGCACACCGACTTCGCTTGCCTACTGTTC---CGTAAGCTG 238483 Query 42876 AGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAG 42935 | |||||| || ||||||||| || ||||| || |||||||| |||||| Sbjct 238484 GTGAACAAGCTGCCGGCGGAGCGGGTGGCGGAGATCATTTGCGACGCCGTGGACATCGAG 238543 Query 42936 AAGG 42939 |||| Sbjct 238544 AAGG 238547 Score = 91.5 bits (100), Expect = 3e-13 Identities = 140/197 (71%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 42937 AGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGT 42996 |||||||| ||||| || ||||||| ||| ||||||||||| || || ||| Sbjct 238892 AGGAGTTCATCACGTCCGCGTTGCCCGTCGAGCTGATCGGCATGAACAGCGCGCTGATGC 238951 Query 42997 GCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGG-TCTCAGCCGCCTC 43055 | |||||||| | | | |||||||| || ||| || | || | | || | Sbjct 238952 GGCAGTACATCGAATTCTGCGCCGACCGGCTGCTGATGGAGCTCGGCTGTGAGAAGAAG- 239010 Query 43056 TACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAAC 43115 |||||| || || ||||||||||| ||||||| |||||| | | |||||||||||| Sbjct 239011 TACAACTCGGCGAACCCCTTCGACTGGATGGAGATGATCTCGCTCCAAGGCAAGACCAAC 239070 Query 43116 TTTTTCGAGAAGCGCGT 43132 || |||||||| || || Sbjct 239071 TTCTTCGAGAAACGGGT 239087 >seq1 Length=7344524 Score = 192 bits (212), Expect = 1e-43 Identities = 569/869 (65%), Gaps = 19/869 (2%) Strand=Plus/Plus Query 42285 ATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCC 42344 ||| |||| | ||||||||| || || |||||| || | || |||||| || Sbjct 2683500 ATCCAGCATGATGACATCTGGGCCGAATATAAGAAGTCGGAAGCCTGTTTCTGGACTGCG 2683559 Query 42345 GAGGAGATTGACCTG-GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGA-ACGAAA 42402 ||||||||||||||| |||||| || | ||| ||| | | | || | |||| Sbjct 2683560 GAGGAGATTGACCTGAGCCAAG-ACCTGACCGATTGGAA-TAGCAAACTAAACGACGATG 2683617 Query 42403 AGTTTTTCCTCA-AAAACAT--ACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATG 42459 || | | ||| ||||||| ||||||||| || || ||||||||||| || || || | Sbjct 2683618 AGCGTCACTTCATAAAACATGTACTGGCCTTTTTTGCGGCCTCTGACGGGATCGTAAACG 2683677 Query 42460 AGAACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACG 42519 |||||||||| | || | ||||| ||||| ||||| | |||||||| Sbjct 2683678 AGAACCTGGCGGAGAACTTTGTAGCCGAGGTACAGTATACGGAGGCCAAATTCTTCTACG 2683737 Query 42520 GCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACA 42576 |||| ||||| || ||||| | ||||| ||| ||| || ||||||| ||| Sbjct 2683738 GCTTTCAGATCATGATGGAGAATATCCACTCGGAGACTTACTCC---CTGCTCATCGACA 2683794 Query 42577 CGTACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCT 42636 | || || || | || || |||||||| ||||| ||||| || || Sbjct 2683795 CCTATATTAAAGACACAAAGGAAAAAGACTACCTGTTCAACGCCATCGAGACCCTGGACT 2683854 Query 42637 GCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCG 42696 || | ||||| || ||||| ||||| | ||||| |||| | | | |||| Sbjct 2683855 GCGTAAAGAAAAAAGCGGAGTGGGCCTTGCGTTGGATTGAGAAT------GGTTCCTTCG 2683908 Query 42697 GCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCT 42756 ||| | || | |||||| | || || ||||| |||||||| || || | ||| | Sbjct 2683909 CTGAGCGCCTCATCGCCTTTGCAGCAGTGGAGGGTATCTTCTTTTCTGGTTCGTTCTGTT 2683968 Query 42757 CCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCA 42816 | ||||||||| | ||| || | | |||||| || || | |||||| || || | | Sbjct 2683969 CGATCTTCTGGTTGAAGAAGCGTGGTTTGATGCCGGGTCTGAGCTTCTCTAATGAGTTGA 2684028 Query 42817 TCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCA 42876 ||||| | || ||||| |||| | ||||||||||| | |||| | ||| ||| Sbjct 2684029 TCAGCCGTGATGAGGGTATGCACTGTGACTTTGCCTGTTTGCTGTACAATGATCACATCA 2684088 Query 42877 GGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGA 42936 ||||||| | || || ||| | | || || | | ||||| || || || | Sbjct 2684089 TCCACAAGCTACCAAAAGATACGGTGAGAGGTATTATTGCCAATGCCGTAGAAATTGAAA 2684148 Query 42937 AGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGT 42996 |||| || | ||| | | || ||||| ||| | || ||||| |||||| |||| Sbjct 2684149 AGGAATTTGTAACGGATGCCCTCCCCGTAGGACTGATTGGTATGAATGCCGACCTGATGT 2684208 Query 42997 GCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCT 43056 || |||||||| ||| || ||||||| || ||| | || | | ||| Sbjct 2684209 GCCAGTACATCGAGTTTGTAGCCGACCGCCTGCTGGTAGCGCTGAAGCACGATAAGATCT 2684268 Query 43057 ACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACT 43116 |||| | ||| ||| | ||||| ||||| ||||| || || ||||||| Sbjct 2684269 TCAACGTAGAGAACCCATTCCCATGGATGGACCTGATCTCTTTGGAAGGTAAAACCAACT 2684328 Query 43117 TTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 | ||||| |||||||| | |||||||||| Sbjct 2684329 TCTTCGAAAAGCGCGTGGGCGACTACCAG 2684357 Score = 154 bits (170), Expect = 3e-32 Identities = 693/1079 (64%), Gaps = 62/1079 (6%) Strand=Plus/Minus Query 243775 CAGGTAGTACATGCCGGTCTTGAGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAG 243834 ||||||||||||||| || ||||| || |||||||| || |||||| | || ||| Sbjct 2686705 CAGGTAGTACATGCCTGTTTTGAGGCCTTGCTCCCAGGCGTAGAAGTGCATCGACGACAG 2686646 Query 243835 CTTCTTCATCTTGAGCTTTGGGTCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTG 243894 ||| | || || || || | ||| |||||||| | ||||||||| Sbjct 2686645 CTTGCCAA-----AGGTTGGGTTCT-----GTACA--AAGAGGTTCATACTCTGGCTCTG 2686598 Query 243895 GTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAGGTCCTTCTGA--GATATCTCA 243952 || | | | |||| || || ||||| ||| | | | ||| ||| || || Sbjct 2686597 ACAGATGTATGCACCCCGGTCGGCAGCCATATCGATAATGACGCGCTGGCTGATTTCCCA 2686538 Query 243953 TACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACC-CTTCGATGTTCTGCACCGA 244011 ||| ||||||||| | ||| | | || | |||| | || | | |||| | ||| Sbjct 2686537 TAC--CGTCTTGTACAGATCCTTTAATT-CTTGAGGAATATCGTCAAAGCTCTGAATCGA 2686481 Query 244012 GCCCTTGTGGACGATGAGCTGGGTGCG-CATGTTATCGTTCCACAGGCCCAAGCGCTCCA 244070 || ||| | | || || || ||| ||| | |||||||||| ||||| || | || Sbjct 2686480 ACCGTTGGCGGCCATCAGGCGG-TGCTTCATATCGTCGTTCCACAAGCCCAGACGGTTCA 2686422 Query 244071 ----GCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGC 244126 |||| | ||||||| ||||||| | || || || || ||| ||||| Sbjct 2686421 AATCGCGC----AGCAGGTGCTTGTTCACGATTACGAATTCACCAGAAAGCGTACGGCGG 2686366 Query 244127 TGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTG 244186 ||||| |||||| || ||||||| | || |||||||||| ||||| | || Sbjct 2686365 CTGTAGATATTGCTGGTGTATGGCTCGAAACATTCGTTGTTGCCCAGGATCTGAGAGGTA 2686306 Query 244187 CTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGG 244246 ||||| ||||| |||| ||||||| ||||| | || ||| | | ||| ||| Sbjct 2686305 GAAGCAGTTGGCATTGGCGCTACCAGCAAGCTGTTGCGCAGGCCATTCTTCTTAATGTCC 2686246 Query 244247 AGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATG 244306 | |||||| ||| ||||| | | || | | |||| | |||||||| Sbjct 2686245 TTCTTCAGCTCGGCCCAATCCCA-ACGTTCG------CTTGGCGTCACA--CCCCACATA 2686195 Query 244307 TCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCG 244366 ||| ||||||| | |||| |||| | || ||||| || || ||| | ||| | | Sbjct 2686194 TCATACTGCAGTACACCCTCGCTGGCTGGTGAGCCCTTATAACTCTCGTAAGTACCTT-G 2686136 Query 244367 CGCTG-GGCCAGCTTACAGCTCTC-GTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCA 244424 | || |||||| |||||| || ||| ||||| || |||||||||||||| || || Sbjct 2686135 CTCTTTGGCCAGGGCACAGCTTTCCGTC-AGGGCCGCATAGTAGATGGTCTCAAAAATGT 2686077 Query 244425 TCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGT 244484 ||||||| | ||| |||| ||| || ||| || ||||| |||||| | | Sbjct 2686076 CTTTGTTCAATTGGCGTGCCTCCTCGCTATCAAATGGGTAGCGCATCAAAATGAAGGCAT 2686017 Query 244485 CGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTT-GGAGCGCATGGCT 244543 | |||| ||||| || || | ||||| || | || ||| | || | || | || Sbjct 2686016 CCGCCAAACCCTGTACACCCAAACCGATTGGGCGATGACGCATATTACTATTGCGT-GCC 2685958 Query 244544 TCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGG 244603 || | ||||| ||||| ||||| |||||||| ||||||||||| | || ||| Sbjct 2685957 TCCTCAATAGGGTAGTAGTTGATATCGATAACCTTGTTCAGGTTGCGGGTCACGATACGG 2685898 Query 244604 ACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTC 244663 || ||| ||| ||| ||||||||| | | || | || | | | || Sbjct 2685897 GTTACTTCGTACAGGCGCTCAAAGTCGTAAGTGCCGTCTTCTTTTACG-TATTTACCC-- 2685841 Query 244664 ACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTG--G 244721 || || | || || ||||| || || || || || || || || | Sbjct 2685840 ------------AGTGCCAAACTCGCGAGGTTACATACCGCTACTTCATC--AGGTGCAG 2685795 Query 244722 TGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGAT 244781 |||||| || |||||||| || ||||| || |||||| ||||||| ||| || | Sbjct 2685794 TGTACTCGATGATCTCGGTACAAAGGTTTGAGCTGCGGATGGTACCCAGGTTCTGCTGGT 2685735 Query 244782 TGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGG 244840 || |||| |||| || |||||||| || || | || ||||| |||| |||| Sbjct 2685734 TGCTCTTGCGGTTGGCCGCATCCTTGTAAAGGATATACGGTGTACCGGTTTCGATCTGG 2685676 >seq223 Length=213198 Score = 147 bits (162), Expect = 4e-30 Identities = 667/1044 (64%), Gaps = 40/1044 (4%) Strand=Plus/Minus Query 244396 GGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGT 244455 |||| ||||||| ||||||||||||||| ||||||| | |||| ||| |||| Sbjct 56202 GGCGCCGTAGTACATGGTCTCGAAGATCTTCTTGTTGAGCTCGCAAGCC-----GCAGAA 56148 Query 244456 GAAGGGGATGCCCATCATCATGAAGACGT------CGGCCAGTCCCTGCACGCCGATGCC 244509 || | | | | ||| |||| | | ||| | |||| ||||||||||| | || Sbjct 56147 CTAGCGTAAGGC-ATCCTCATAAGGGCGTACGTGTCCGCCAAGCCCTGCACGCCCAGCCC 56089 Query 244510 GATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTC 244569 | || | ||| | |||| || || ||||||| || | |||||| || || | || Sbjct 56088 CACCGGCCGGTGCGTCATGTTCGAAAGCTTGGCTTCCGGGATGGGGTAGAAATTCCTATC 56029 Query 244570 GATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTC 244629 || ||| ||||||||| || | | | | ||||| ||| || ||||| Sbjct 56028 AATGACCCGGTTGAGGTTTCGCACCACCTGCCCCGCCACGTCCTGGAGCTCCTTGAAGTC 55969 Query 244630 GTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGC 244689 | | | | ||| | | || | |||||| | || ||| || | || Sbjct 55968 GAAAGATGCGTGGTCC---GTGTAGGGGTCCCTCACCATGGCGGATAGGTTGATGGATGC 55912 Query 244690 CAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTT 244749 ||||||||| || ||| ||| | | |||||||| | ||||||| ||||||||| Sbjct 55911 CAGGTTGCACACCGCCGTTTCCGATGGGGACGTGTACTGAATGATCTCGGCGCAGAGGTT 55852 Query 244750 ACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTG-GCG-TTGCAGGCGTCCTTG 244807 || |||||| | || ||||| ||| ||| || | ||| || ||||||||| Sbjct 55851 GGAGCTCTTGATAGCTCCGAGGTGGCCGTGGTTG--CTGGTGCGATTAGCCGCGTCCTTG 55794 Query 244808 TAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCC 244867 | | || | ||| || ||||| | ||| || | | || | |||||| || | | Sbjct 55793 AACAAGATATACGGCGTGCCTGTCTCCACCTGCACGTCTATGATGTGGTTCCACAGCTGC 55734 Query 244868 CTAGCCTTGACCGT-CCTG-CGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCT 244925 || || || || ||| | ||||| |||||| ||||||| |||||| || | | Sbjct 55733 CTGGCGGAGA--GTACCTCTCTGGCCTTTCCCTCTTCCTCGTACTTGGTGTATAGATCTT 55676 Query 244926 CGAACTCGGGGCCCCAGACCTCGTCTAGGCCGG--GGCACGACGCCGGGCACATGAGACT 244983 |||| | ||| ||| ||| ||||| | | | || | || | | || Sbjct 55675 CGAATGCCTCGCCATGGACGTCGGACAGGCCCGTTGCCTCGTTG--GGTGAGAACAGCGC 55618 Query 244984 CCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAA 245043 ||||| ||| | | ||||||| |||||| | ||| || | ||| || || ||| Sbjct 55617 CCACTGTCCGTTGGATTCCACCCTCTTCATGAACAAGTCCGGCACCCACAGCGCAAAGAA 55558 Query 245044 GAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAA 245103 ||||||||||| | || | ||| ||| ||||| || ||| ||||| || | Sbjct 55557 GAGGTCCCTGGCTCGCTCCAAGTCGTTGCCCGTGTTTTTTTTCATGTCCAAGAACGCGCG 55498 Query 245104 GACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCC 245163 | |||| ||||||| ||||||| ||||| || | | || ||| ||| || Sbjct 55497 TATGTCGGCGTGCCACGGCTCCAGGTAGAAGGCAAACGACCC------CTTCCTGCGCCC 55444 Query 245164 C---TGGTCCACCATCCTCTCGAGCG--CGTTGAAGATGCGCAGGGTAGGCACTATGCCG 245218 | ||||| | | | | |||| ||||||| || ||||| | ||||| |||||| Sbjct 55443 CGCTTGGTCGATGAAGCGC--GAGCAGTCGTTGAACATCCGCAGCATCGGCACGATGCCG 55386 Query 245219 TTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGAC 245278 |||| | ||| || || ||||||| | ||| | || | | || | ||| | Sbjct 55385 CTAGACTTTCCGCCCGTTCCTCTGATGTACGAGCCGGTCCCGCGTATGTCGTGGATACTC 55326 Query 245279 ATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATG 245338 | ||| | || || |||| |||||| ||| | || ||| ||| | ||||| || Sbjct 55325 ACGCCGATACCCCCCGCGTACTTGGATATGTGCGCACAGTCCTTTAGAGTGTCGAAAATC 55266 Query 245339 CCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGG 245398 ||||||| | || |||||||| ||| || ||||| || |||| ||| | | ||| Sbjct 55265 CCCTCCACGGAATCGCTCTTCATGTGGAGGAGGAAGCAAGACGACATCTGCGCGTGCGGG 55206 Query 245399 CTGCACGAGTTGAACAGAGTGGGG 245422 ||| | |||||||||||| ||| Sbjct 55205 GTGCCGGCGTTGAACAGAGTCGGG 55182 >seq9 Length=1386778 Score = 127 bits (140), Expect = 4e-24 Identities = 158/213 (74%), Gaps = 5/213 (2%) Strand=Plus/Plus Query 42727 AGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC-G 42785 ||||||| ||||||||||| |||| | ||||||||||||||||| || || ||| | Sbjct 883807 AGGGCATTTTCTTCTCGGGGAGCTTCTGCGCCATCTTCTGGCTCAAGAAG-CGGGGTCTG 883865 Query 42786 ATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGAC 42845 |||||||| || || || |||||||| | |||||| | || ||||| ||||| | ||| Sbjct 883866 ATGCCCGGGCTGACGTTTTCGAACGAGATGATCAGCCGCGATGAGGGCCTGCACTGCGAC 883925 Query 42846 TTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGG 42905 || ||||||| || ||| | ||| | ||||||| ||||| ||| | Sbjct 883926 TTCGCCTGCCAGCTCTTC---CACTCCCTGGAGAACAAGCCAAGTCAGGAGACGGTGATG 883982 Query 42906 GCCATCATCACGGAGGCCGTGGAGATCGAGAAG 42938 |||||| ||| ||||||||| ||| |||||||| Sbjct 883983 GCCATCGTCAAGGAGGCCGTCGAGGTCGAGAAG 884015 >seq281 Length=162485 Score = 116 bits (128), Expect = 7e-21 Identities = 100/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 244682 ACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTG 244741 |||||| | |||||||| || ||||||||| | | || ||||||| || ||||||||| Sbjct 76814 ACGCTGCCGAGGTTGCACACCGCCACCTCCCCGGGGTCTGTGTACTCCACGATCTCGGTG 76873 Query 244742 CAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCG 244801 ||||| || | ||| ||| ||||||||||||||||| ||| |||| |||||||||| Sbjct 76874 CAGAGATTGGAGGACTGGATAGTGCCCAGGTGCTGGTGGTTGCTCTTGCGGTTGCAGGCG 76933 Query 244802 TCCT 244805 |||| Sbjct 76934 TCCT 76937 >seq337 Length=117279 Score = 100 bits (110), Expect = 5e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 244720 GGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTG 244779 |||||||| ||| ||||| |||||||||||| |||||||||||||||||| || || Sbjct 22913 GGTGTACTCGACGATCTCCGTGCAGAGGTTAGAAGACTTGATGGTGCCCAGGTTCTTCTG 22854 Query 244780 ATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTG 244839 ||| |||| |||||| |||||||| || |||||| | || ||||| |||| || Sbjct 22853 GTTGCTCTTGAAGTTGCACGCGTCCTTATACAGCATGTACGGGGTGCCGGTTTCGACCTA 22794 Query 244840 GGCGA 244844 |||| Sbjct 22793 AGCGA 22789 Score = 91.5 bits (100), Expect = 3e-13 Identities = 118/162 (73%), Gaps = 6/162 (4%) Strand=Plus/Minus Query 245008 CTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCT---GCTC 245064 |||||||||||||||||||||||| | ||| | |||||| ||||| | | || |||| Sbjct 21461 CTGCATGAAGAGGTCGGGGATCCACATGGCGTAGAAGAGATCCCTCGCGCGCTCGAGCTC 21402 Query 245065 GTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTC 245124 || ||| ||||||| | || ||||| ||| | | ||||| ||||||| ||||| Sbjct 21401 GT---TGCCGTGGTTCTTCTTGAGGTCCAAGAAGGCCACCACGTCCGCGTGCCATGGCTC 21345 Query 245125 CATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTG 245166 || ||| || |||| | ||| ||||| ||| ||||| Sbjct 21344 CAGGTACACGGCGATCGAGCCCTTGCGCTTACCGCCGCCCTG 21303 Score = 84.2 bits (92), Expect = 4e-11 Identities = 138/198 (70%), Gaps = 6/198 (3%) Strand=Plus/Minus Query 243947 ATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCGATGTTCTGC 244006 ||||| || |||||||||||| | |||||| | || ||||| | | |||||| Sbjct 25371 ATCTCCCACACCGTCTTGTAGAGGTCCTTGAGCTCCTGGGGGATCTGGCGCACGTTCTGG 25312 Query 244007 ACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGC 244066 ||||| |||| || |||||| |||| |||||| | | ||||||||||| | | Sbjct 25311 ACCGATCCCTGGTCCGCGATGATCTGGTTGCGCACCTCTGGGGTCCACAGGCCC---CTC 25255 Query 244067 TC---CAGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCACGCGG 244123 || || || | |||| | |||||||||| |||||||||| ||||||||| Sbjct 25254 TCAGTGAGGTCCCTAAGGAGGTACTTGTTCACCACGGTGAACTCTCCCGCCAGCACGCGC 25195 Query 244124 CGCTGGTAGAGGTTGCTG 244141 | | ||| | ||||||| Sbjct 25194 CTGTTGTACATGTTGCTG 25177 >seq10 Length=1322232 Score = 84.2 bits (92), Expect = 4e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 245320 CTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGA 245379 ||||| ||||| |||||||| ||||||||| ||||||| | ||||| |||||| Sbjct 357145 CTTGAGCGTGTCGTAGATGCCCTCGATGCTGTCCTCCTTCATGCTCAGCAGGAAGCAGCT 357086 Query 245380 GGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 ||||||||||| |||| | | | |||||| || |||||| ||||| ||||| | Sbjct 357085 CGACAGCTGGGGGCGGGGGGTCCCGGCGTTGAAAAGCGTGGGGGACGCGTGCGTAAA-CA 357027 Query 245440 GCGGCT-CGAGAGGAACCCGTACGTCTGGA 245468 || ||| ||| | || |||||| || || Sbjct 357026 GCCGCTGCGACATGAGGTCGTACGACTCGA 356997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944330559296320