Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_010116.1 Length=58663 Score E Sequences producing significant alignments: (Bits) Value seq273 123 9e-24 >seq273 Length=166498 Score = 123 bits (136), Expect = 9e-24 Identities = 127/166 (77%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 6596 ATCATGCGCGGGACCTGGGATTGGGCGGAGCCGGGCGTGCTGTTCATCGACGCGATCAAC 6655 ||||||| | ||||| |||| || |||||||| ||| | ||||||||| |||||| Sbjct 146580 ATCATGCAGGCGACCTATGATTACGCCGAGCCGGGTGTGATCTTCATCGACCGCATCAAC 146521 Query 6656 CGCATGAACAACCTCTGGTACTGCGAGACCATCGCCGCCACGAACCCCTGCGGTGAGCAA 6715 | |||||||| | || ||||| ||||| ||||| || ||||||||||| || || Sbjct 146520 CAGGCCAACAACCTGAGCTATTGCGAAACCATTGCCGCGACCAACCCCTGCGGGGAACAG 146461 Query 6716 CCGCTCCCGCCCTACGGTGCCTGCTTGTTGGGCTCCTTCAACCTGG 6761 ||||| |||||||| || |||||| | ||||||| ||||| ||| Sbjct 146460 CCGCTGCCGCCCTATGGGGCCTGCCTTCTGGGCTCGGTCAACTTGG 146415 Score = 89.7 bits (98), Expect = 2e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 7132 CGAGGACGTGCGGGACGCCATCGCCAAATACGGCATCCGCAACTCCCACCTCACTTCCAT 7191 |||||||||||| | ||| | ||| || | ||||||||||| | | || || ||| | Sbjct 146044 CGAGGACGTGCGCGCAGCCGTGGCCGAACATGGCATCCGCAATGCGCTGCTGACGTCCGT 145985 Query 7192 CGCCCCGACCGGGACCATCAGCCTGTGCGCCGACAACGTCAGCTCCGGGATTGAGCCGGT 7251 || ||||| ||||| || |||| |||| |||||||| |||||||| |||||||| Sbjct 145984 TGCGCCGACGGGGACGATTTCGCTGTATGCCGGGAACGTCAGTTCCGGGATCGAGCCGGT 145925 Query 7252 GTTCGCCTA 7260 || ||||| Sbjct 145924 CTTTGCCTA 145916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187598369287000