Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1 239 5e-58 seq115 125 9e-24 seq3 125 9e-24 seq244 120 4e-22 seq5 105 8e-18 seq4 102 1e-16 seq337 95.1 1e-14 seq566 91.5 2e-13 >seq1 Length=7344524 Score = 239 bits (264), Expect = 5e-58 Identities = 1100/1727 (64%), Gaps = 30/1727 (2%) Strand=Plus/Minus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 || ||||||||||| || || ||||| || |||| |||||| || | |||||||| ||| Sbjct 2686707 CGCAGGTAGTACATGCCTGTTTTGAGGCCTTGCTCCCAGGCGTAGAAGTGCATCGACGAC 2686648 Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716 | |||| | ||||| | | | |||||||||||||| ||| ||| |||| | Sbjct 2686647 AGCTTGCCAAAGGTTGGGTTCTGTACAAAGAGGTTCATACTCTGGCTCTGACAGATGTAT 2686588 Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTG 113776 || || || || |||||||| || | | | |||||||||| || || || Sbjct 2686587 GCACCCCGGTCGGCAGCCATATCGATAATGACGCGCTGGCTGATTTCCCATACCGTCTTG 2686528 Query 113777 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTG 113836 || || | ||| | || | || ||||| | | | || || || || || Sbjct 2686527 TACAGATCCTTTAATTCTTGAGGAATATCGTCAAAGCTCTGAATCGAACCGTTGGCGGCC 2686468 Query 113837 ACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGA 113896 | || | | | ||||||||| | ||| | || | || | ||| || || Sbjct 2686467 ATCAGGCGGTGCTTCATATCGTCGTTCCACAAGCCCAGACGGTTCAAATCGCGCAGCAGG 2686408 Query 113897 TGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTG 113956 ||||| || || | || || ||||| | || || || | ||||||||| | ||| Sbjct 2686407 TGCTTGTTCACGATTACGAATTCACCAGAAAGCGTACGGCGGCTGTAGATATTGCTGGTG 2686348 Query 113957 TATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGT 114016 |||||||| || || || ||||| |||| ||| || | ||| || || || ||||| || Sbjct 2686347 TATGGCTCGAAACATTCGTTGTTGCCCAGGATCTGAGAGGTAGAAGCAGTTGGCATTGGC 2686288 Query 114017 GCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAG 114076 || | || | |||||| || || || || | | ||||| | ||| || || |||| Sbjct 2686287 GCTACCAGCAAGCTGTTGCGCAGGCCATTCTTCTTAATGTCCTTCTTCAGCTCGGCCCAA 2686228 Query 114077 TCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGG 114134 || | ||| |||| | || | | |||||||||| |||| || | ||| | | || Sbjct 2686227 TCCCAACGTT-CGCTTGGCGTCACAC-CCCACATATCATACTGCAGTACACCCTCGCTGG 2686170 Query 114135 CTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCT 114194 |||| || |||| | | ||||||| | || | | | |||| | |||| || Sbjct 2686169 CTGGTGAGCCCTTATAACTCTCGTAAGTACCTTGCTCTTTGGCCAGGGCACAGCTTTCCG 2686110 Query 114195 CGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTC-ATTGCCTTGGCCTCGTCG 114253 ||||| || | || || |||||||||||| ||| |||| | | ||||| ||| Sbjct 2686109 TCAGGGCCGCATAGTAGATGGTCTCAAAAATGTCTTTGTTCAATTGGCGT-GCCTCCTCG 2686051 Query 114254 GAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCA 114313 |||||| | | || |||||| || ||||||| | ||| || ||||| | || Sbjct 2686050 CTATCAAATGGGTAGCGCATCAAAATGAAGGCATCCGCCAAACCCTGTACACCCAAACCG 2685991 Query 114314 ATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCG 114373 ||||||||||| | ||||||| || || || ||| | || || | || ||||| Sbjct 2685990 ATTGGGCGATGACGCATATTACTATTGCGTGCCTCCTCAATAGGGTAGTAGTTGATATCG 2685931 Query 114374 ATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCA 114433 |||||| | || || || ||| || | || | ||| | || || | || Sbjct 2685930 ATAACCTTGTTCAGGTTGCGGGTCACGATACGGGTTACTTCGTACAGGCGCTCAAAGTCG 2685871 Query 114434 AAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACA 114493 || ||| ||||| || || || ||| || || | ||| || ||||| || Sbjct 2685870 TAAGTGC---CGTCTTCTTTTACGTATTTACCCAGTGCCAAACTCGCGAGGTTACATACC 2685814 Query 114494 GAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATG 114553 | ||||| |||||||||| || || || ||||| | ||||| || ||| Sbjct 2685813 GCTACTTCATCAGGTGCAGTGTACTCGATGATCTCGGTACAAAGGTTTGAGCTGCGGATG 2685754 Query 114554 GTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGC 114613 || |||| ||||| || || ||| ||| ||||||||||||||| || || || Sbjct 2685753 GTACCCAGGTTCTGCTGGTTGCTCTTGCGGTTGGCCGCATCCTTGTAAAGGATATACGGT 2685694 Query 114614 GTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCGGCTGGCAC--AG 114671 || || || || | ||| | | |||||| ||| | ||| ||| || Sbjct 2685693 GTACCGGTTTCGATCTGGCTTTCCAAAATAGCGAACCACAAATCTTGTGCTTTTACCACT 2685634 Query 114672 TGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCA 114731 | ||| ||| || ||||||| ||||||||| ||||| ||||| ||||| ||| Sbjct 2685633 TTGCG--GGCACGACCCTCCTGCTCGTACTTATGATAGAGTGCTTCGAACTCGCCACTGT 2685576 Query 114732 CGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCT 114791 | || | || ||||| | || || ||| || ||||| | || || | Sbjct 2685575 GTACGTCAAACAGATTCGGTGCTTCATTCGGATCGAACAGCGACCAGTCGCCGTTTTCTT 2685516 Query 114792 CAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAG 114851 || || |||||| | || || ||||| | ||| |||| | || ||| ||| Sbjct 2685515 TCACGCGGCGCATGAACAAATCCGGAATCCACATAGCGTAGAACAAGTCACGAGCGCGCA 2685456 Query 114852 CTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACG 114911 ||||| | || || || || |||| ||||| | | ||| |||||||| | Sbjct 2685455 ACTCTTCCTTACCGTGGTTTTTCTTCAGTTCCAGGAAGTCGAATACATCTGCGTGCCAGG 2685396 Query 114912 GTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCG 114968 | |||||||| | |||| | || ||||| || |||| |||||| || || | | Sbjct 2685395 GCTCCAGGTAAATAGCGAAGGCACCTTTACGCTTACCACCACCCTGGTCAACGTAGCGGG 2685336 Query 114969 CTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTG-GCCATTTGTCCCC 115027 | ||| | || ||||| | ||| || | ||||| | | | | || ||| || Sbjct 2685335 CAGTGTCGTTGAATACTTTCAACATCGGTACAATACCGT-TGCTGGTACCGCCTGTACCT 2685277 Query 115028 CGAAT---ACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCC 115084 || | | |||| || | || | ||| ||| || ||||||||| || ||| Sbjct 2685276 TTGATGTAGCTACCCTTA---GCCCGGATGTTATGAATGCTCAAACCAATACCACCAGCC 2685220 Query 115085 CACTTTGAGATTTGCGCGCACTCCG--TGAGACTGCCGTAGATCCCGTCGATCGAGTCAC 115142 || || || ||||||||| || ||| | || | || ||| || || Sbjct 2685219 GAC--TGGGAAATGCGCGCACAGCGGTCGAGGGTTTCGAAAATACCGGGAATGCTATCTT 2685162 Query 115143 CCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGA 115202 || | | | | ||||||||||||||||| |||||| | |||||| | || || |||| Sbjct 2685161 CCGTCATCGACAAAAGGAAGCAGCTCGACAATTGTGGGCGTGGTGTGGCCGCATTAAAGA 2685102 Query 115203 GGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACG 115261 |||| || || |||||||| ||| || | || |||||| | || ||||||| || Sbjct 2685101 GGGTAGGAGTAGCGTGGATAAAC-CACTTCTGAGACATCAGGTTATACGTCTCCAGCACA 2685043 Query 115262 GCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACAT 115308 ||| ||| ||||| || || | || || ||||| ||||| Sbjct 2685042 CTCTCAATATCTGTTCCGTGGATGCCTACCGCAACGCGCATCAACAT 2684996 Score = 145 bits (160), Expect = 9e-30 Identities = 349/521 (67%), Gaps = 13/521 (2%) Strand=Plus/Minus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| | |||||| |||||| ||| | ||||| ||||||| ||| || Sbjct 2684063 GGCAAAGTCACAGTGCATACCCTCATCACGGCTGATCAACTCATTAGAGAAGCTCAGACC 2684004 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||| | ||| ||||||||||||||||| |||| ||| || ||||| || |||||||| Sbjct 2684003 CGGCATCAAACCACGCTTCTTCAACCAGAAGATCGAACAGAACGAACCAGAAAAGAAGAT 2683944 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAA 126225 |||||||| || || || | ||| |||||||| ||||| | | | | |||| Sbjct 2683943 ACCCTCCACTGCTGCAAAGGCGATGAGGCGCTCAGCGAAGGAAC----CAT--TCTCAAT 2683890 Query 126226 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 126285 ||| || ||||||| ||| ||||||| | || | ||||| ||| || | || Sbjct 2683889 CCAACGCAAGGCCCACTCCGCTTTTTTCTTTACGCAGTCCAGGGTCTCGATGGCGTTGAA 2683830 Query 126286 GAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 126345 || | | ||||| || ||||| || || | || ||||| || || || || Sbjct 2683829 CAGGTAGTCTTTTTCCTTTGTGTCTTTAATATAGGTGTCGATGAGCAGGGAGTAAGTCTC 2683770 Query 126346 GCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTAT-C 126403 ||||| | | ||| || | |||| | ||||||| | || || | ||| | Sbjct 2683769 CGAGTGGATATTCTCCATCAT-GATCTGAAAGCCGTAGAAGAATTTGGCCTC-CGTATAC 2683712 Query 126404 TGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCA 126463 |||||||| | |||| || | | ||||| || || || || || | ||| Sbjct 2683711 TGTACCTCGGCTACAAAGTTCTCCGCCAGGTTCTCGTTTACGATCCCGTCAGAGGCCGCA 2683652 Query 126464 AAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAG---GGTCTTCCAG 126520 ||||| ||||| | || |||||||| | | |||| ||||| || | | ||||| Sbjct 2683651 AAAAAGGCCAGTACATGTTTTATGAAGTGACGCTCATCGTCGTTTAGTTTGCTATTCCAA 2683592 Query 126521 TCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 ||| || || | || || | ||||||||||||||| Sbjct 2683591 TCGGTCAGGTCTTGGCTCAGGTCAATCTCCTCCGCAGTCCA 2683551 >seq115 Length=378902 Score = 125 bits (138), Expect = 9e-24 Identities = 145/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| || |||||||| ||| |||||| || |||||||||||||| || ||||| || || Sbjct 238450 GTGCAGGCCCTCGTCGCGGCTGATGAGCTCGTTCGAGAAGCACAGGCCGGGCATCAGGCC 238391 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 ||||| || | |||||| | || || || || ||||||||||| |||||||| Sbjct 238390 GCGCTTTTTGAGCCAGAAGACGGCGCAGAAGCTGCCGGAGAAGAAGATGCCCTCCACGGC 238331 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGA-CTTTGTGTCAAACCACTTCATCG 126236 ||||||||||| ||| ||||| || ||||| ||| | | | || ||||| || || Sbjct 238330 CGCGAACGCAACGAGCCGCTCCGCGAAGGA-CGCCAGGTCCGGGTTGCACCACCGCAGCG 238272 Query 126237 CCCACTGCGCCTT 126249 ||||| |||||| Sbjct 238271 CCCACCTCGCCTT 238259 >seq3 Length=4400433 Score = 125 bits (138), Expect = 9e-24 Identities = 337/507 (66%), Gaps = 10/507 (2%) Strand=Plus/Minus Query 10774 CACGGTGATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAAT 10833 |||||| | | || || || || ||||| || || | ||| ||| || | || Sbjct 1814029 CACGGTCACTTGGCGGTCGAAACGGCCTGGACGCAGCAAGGCAGGGTCGAGCACGTCTGG 1813970 Query 10834 GCGGTTCGTCGCCGCGATGACAACGATGCCCGTC-TCGTTATCAAAGCCATCCATCTCAG 10892 |||||| |||||||||| || | || |||||| | | ||||| || |||||||| Sbjct 1813969 GCGGTTGGTCGCCGCGACGATGATAAT-CCCGTCATTGGCTTCAAACCCGTCCATCTCGA 1813911 Query 10893 TCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGGCATACCACCCGCACTGC 10952 || ||| || || | ||||| || || || |||||| || | ||| || | || Sbjct 1813910 CCAGGAGCTGGTTCAGCGTTTGCTCACGCTCGTCATTCCCGCCGCCAAGACCGGCGCCGC 1813851 Query 10953 GTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGGG 11012 || |||||| ||||| || ||||||||||| | ||| || || ||| || Sbjct 1813850 GTGAGCGACCGACCGCGTCGATCTCATCGATGAAGATGATGCATGGCGCATTGCGCTTGG 1813791 Query 11013 CAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAAT 11072 | ||| || || || ||||| | |||| |||||||| ||||||||||| ||||| | Sbjct 1813790 CTTGTTCGAACATGTCGCGGACACGGCTGGCGCCGACACCGACAAACATTTCAACAAAGT 1813731 Query 11073 TGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGG 11131 | | | ||| || | | ||| || ||| | ||| || |||||||| || ||||| Sbjct 1813730 CAGAGCCTGAA-ATCGTAAAGAATGGCACGCCTGCTTCGCCTGCGATGGCGCGCGCGAGC 1813672 Query 11132 AGGGTCTTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC- 11190 ||||| || || || || || || |||| || || || |||||| || | || Sbjct 1813671 AGGGTTTTACCGGTTCCTGGAGGGCCAACGAGCAGCGCGCCTTTGGGGATCTTGCCGCCG 1813612 Query 11191 --ACTTCCAAAGTAGCGCTCAGGTTGTTTAAGGAAGTCCACGATTTCTTCCAATTCATCC 11248 | || | | ||| || | ||| |||||||| |||| |||||| | ||| || Sbjct 1813611 AGGCGCTGGAATTTG-GCT--GGGTCTTTCAGGAAGTCGACGACTTCTTCGAGTTCTTCT 1813555 Query 11249 TTCGCAGCGTCGATGCCTTCAACGTCA 11275 || || |||| | ||| |||| ||| Sbjct 1813554 TTGGCCTCGTCCACACCTGCAACATCA 1813528 >seq244 Length=185980 Score = 120 bits (132), Expect = 4e-22 Identities = 338/510 (66%), Gaps = 18/510 (4%) Strand=Plus/Plus Query 10774 CACGGTGATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAAT 10833 |||||||| || ||| || || || || || || || || ||| ||| || | || Sbjct 158984 CACGGTGACCTGACGGTCGAAACGGCCGGGACGCAGCAGCGCGGGGTCCAGAACGTCGCG 159043 Query 10834 GCGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTA---TCAAAGCCATCCATCTC 10890 ||||| || || || | || | || ||| ||||| ||||| || ||||| || Sbjct 159044 ACGGTTGGTGGCGGCCAGGATGATGACACCC---TCGTTGGCCTCAAACCCGTCCATTTC 159100 Query 10891 AGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATT--CGCGGGCATACCACCCGCA 10948 || || || || | || ||||||||||| || || | | | |||| || ||| Sbjct 159101 GACCAGCAGCTGGTTCAGCGTCTGTTCGCGTTCGTCGTTACCACCGCCATA--GCCGGCA 159158 Query 10949 CTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCA 11008 | || || ||| |||||||| ||||| |||||||| |||||||| ||| || | Sbjct 159159 CCACGATGGCGACCCACGGCGTCGATTTCGTCGATGAAGACGATACAGGGTGCGTTCTTC 159218 Query 11009 CGGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACA 11068 ||| ||| || || || ||||| | ||||| ||||| || |||||||| || Sbjct 159219 TTGGCCTGTTCGAACATGTCGCGGACACGGGATGCACCCACACCAACGAACATTTCAACG 159278 Query 11069 AAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGC 11127 || | | | | | | || | || |||||| ||| | ||||| |||||||| ||||| Sbjct 159279 AAGTCCGAGCCCG-AGATGGTGAAGAAGGGCACGCCCGCCTCACCAGCGATGGCACGGGC 159337 Query 11128 GAGGAGGGTCTTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGC 11187 || || ||||| || || || || || | ||||| || || |||||| || | Sbjct 159338 CAGCAGCGTCTTACCGGTGCCCGGAGGGCCAACCAGAAGCGCGCCTTTGGGGATCTTGCC 159397 Query 11188 ACC---ACTTCCAAAGTAGCGCTCAGGTTGTTTAAGGAAGTCCACGATTTCTTCCAATTC 11244 || || | || | | | ||||| ||||| || ||||| ||||||| || Sbjct 159398 GCCGAGACGGCTGAACTTCTG--CGGGTTG-CGCAGGAATTCGACGATCTCTTCCAGCTC 159454 Query 11245 ATCCTTCGCAGCGTCGATGCCTTCAACGTC 11274 ||||| || |||||||||| | ||||| Sbjct 159455 TTCCTTGGCTTCGTCGATGCCGGCGACGTC 159484 >seq5 Length=3486096 Score = 105 bits (116), Expect = 8e-18 Identities = 252/374 (67%), Gaps = 18/374 (5%) Strand=Plus/Minus Query 10787 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 10846 |||||||| || || ||||| | | || ||||| | || ||||| ||||| Sbjct 1077581 CGATCAAAACGGCCAGGGCGCAATAAAGCACGATCAAGTACGTCTGGACGGTTGGTCGCA 1077522 Query 10847 GCGATGACAACGATGCCCGTCTCGTTA---TCAAAGCCATCCATCTCAGTCAAGAGTTGA 10903 ||||| |||| | ||| |||||| ||||| |||||||||||| || | ||| Sbjct 1077521 GCGATCACAATCACGCCT---TCGTTACCTTCAAACCCATCCATCTCAACCAGCATTTGG 1077465 Query 10904 TTGATGGTTTGTTCGCGTTCATCATT--CGCGGGCATACCACCCGCACTGCGTTGCTTAC 10961 |||| ||||| || || |||||||| ||| |||| ||| | | || || | | Sbjct 1077464 TTGAGCGTTTGCTCCCGCTCATCATTGCCGCCACCATA--ACCGCCGCCACGGTGTCTGC 1077407 Query 10962 CGACGGCGTCAATTTCATCGATGAAAACGATACA---CGGTTGATTTTCACGGGCAACTT 11018 | || ||||||||||| ||||| |||| ||||| || || |||| ||| | Sbjct 1077406 CAACAGCGTCAATTTCGTCGATAAAAATAATACAGGGCGCCTGTTTTT---TGGCCTGAT 1077350 Query 11019 CAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAAT-TGGCG 11077 | || || || || || | |||| || || || ||||||||||| || |||| | | Sbjct 1077349 CGAACATGTCGCGCACGCGGCTGGCGCCAACGCCAACAAACATTTCAACGAAATCAGACC 1077290 Query 11078 GCGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTC 11137 || | | | || ||| || || |||| |||||| ||||| ||| ||| | | ||| Sbjct 1077289 CCGATATAGT-GAAGAATGGTACCTTGGCTTCACCGGCGATCGCTTTGGCCATCAAGGTT 1077231 Query 11138 TTCCCCGTCCCAGG 11151 || || || ||||| Sbjct 1077230 TTACCTGTTCCAGG 1077217 >seq4 Length=3599618 Score = 102 bits (112), Expect = 1e-16 Identities = 265/400 (66%), Gaps = 28/400 (7%) Strand=Plus/Minus Query 10766 GGTAGGGACACGGTGATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGG 10825 || ||||| ||||| | || | || || || ||||||||||| | || || || Sbjct 938047 GGAAGGGAAACGGTCACCTGCCTGTCGAAACGGCCTGGGCGGAGCAACGCCGGATCCAGA 937988 Query 10826 ATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCAAAGCCATCC 10885 | || ||||||||||||||||||| | || ||| || | |||| || |||||| Sbjct 937987 ACGTCCGGACGGTTCGTCGCCGCGATGATGATGACACCCTCCTGGGTATCGAAACCATCC 937928 Query 10886 ATCTCAGTCAAGAG---TTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGGCATACCA 10942 ||||| || ||| ||| || | || ||||| || ||||||| || |||| Sbjct 937927 ATCTC---CACGAGCAATTGGTTCAGCGTCTGTTCACGCTCATCAT------GCCCACCA 937877 Query 10943 CCCGCACTG------CGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACAC 10996 ||| || | || || || || || || || ||||||||||||| | ||| Sbjct 937876 CCCATACCGTGGCCACGGTGGCGGCCAACCGCATCGATCTCATCGATGAAAATCAGGCAC 937817 Query 10997 GG----TTGATTTTCACGGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACC 11052 || || ||||| | || || || ||||| ||||| | ||||| ||||| Sbjct 937816 GGGGCATTCTTTTTCCCCTGC----TCGAACATATCGCGGACGCGGGACGCACCCACACC 937761 Query 11053 CACAAACATTTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCAC 11111 ||||||||||||||||| | || | | | || | || ||| || || | | ||||| Sbjct 937760 TACAAACATTTCCACAAAGTCGGAACCAG-AGATCGAGAAGAACGGCACATCCGCTTCAC 937702 Query 11112 CCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCAGG 11151 | || || || ||||| || || || || || || || || Sbjct 937701 CAGCAATCGCGCGGGCAAGAAGAGTTTTACCTGTTCCCGG 937662 >seq337 Length=117279 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 115098 GCGCGCAC-TCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATA 115156 || ||||| | | |||| || |||| ||||||| ||| ||| |||| | | || Sbjct 20488 GCACGCACCTGCTTGAGCGTGTCGTATATCCCGTTGATGCTGTCCTCCTTCATGGTGAGC 20429 Query 115157 AGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCG 115216 ||||||||||| ||||| || ||| | || || || |||||||| || || ||||| ||| Sbjct 20428 AGGAAGCAGCTGGACATCTGCGGCTTGGGCGTGCCGGCGTTGAACAGCGTCGGTGTTGCG 20369 Query 115217 TGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCC 115276 || |||| | | || ||||| ||||| ||||| | || | ||||| ||| Sbjct 20368 TGCGTGAAGAGCCTCTGCGACATGAGGTCGTACGTCTCGATCACCTTGTCGATGTCGTCC 20309 Query 115277 CCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCA 115328 ||| || || | ||| || ||||| | ||||| || || |||||| || Sbjct 20308 TTGTGGATGCCCACCGACACGCGCATGATCATGTGCTGCGGCCTTTCCACCA 20257 >seq566 Length=34611 Score = 91.5 bits (100), Expect = 2e-13 Identities = 299/451 (66%), Gaps = 14/451 (3%) Strand=Plus/Minus Query 10738 CAAAATCTTCTCGCGACCGCGCACA-CTGGGTAGGGACACGGTGATCTTACGATCAAAGC 10796 |||||||| ||| ||||||| || | | || | || || || || ||| ||||| | Sbjct 15055 CAAAATCTGCTCACGACCGCTCAAATCAGGATTTGGT-ACAACGACCTGACGGTCAAAAC 14997 Query 10797 GACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAA 10856 |||||||||| || | || ||||| | ||| ||||| || ||||| || | || Sbjct 14996 GACCTGGGCGCAGCAATGCTGGATCAAGCACGTCAGGACGGTTGGTAGCCGCAATAAGAA 14937 Query 10857 CGATGCCCGTC--TCGTTATCAAAGCCATCCATCTCAGTCAAG-AGTTGATTGATGGTTT 10913 ||| | || ||| | ||||| |||||||||||| |||| | ||| || | |||| Sbjct 14936 TGATACTT-TCATTCGCT-TCAAAACCATCCATCTCA-ACAAGCAATTGGTTCAATGTTT 14880 Query 10914 GTTCGCGTTCATCATT--CGCGGGCATACCACCCGCACTGCGTTGCTTACCGACGGCGTC 10971 | || || |||||||| | | | | | ||| || | || || ||| || || || Sbjct 14879 GCTCACGCTCATCATTACCACCGCC--AAGACCAGCGCCACGATGACGACCCACAGCATC 14822 Query 10972 AATTTCATCGATGAAAACGATACACGGTTGATTTTCACGGGCAACTTCAAAGATATCTCG 11031 ||| |||||||| || | ||| || ||| |||| || ||| || || || || Sbjct 14821 AATCTCATCGATAAAGATGATGCAAGGTGAGTTTTTCTTAGCCTGTTCGAACATGTCACG 14762 Query 11032 GACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGCGGCGGAACATTG-GA 11090 || | ||||| |||||||| |||||||| ||||| | | | | | |||| | Sbjct 14761 CACACGAGATGCACCCACACCCACGAACATTTCAACAAAGTCAGAACCTG-AGATTGTGT 14703 Query 11091 TGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCAG 11150 ||| || || || | |||||| || | | || || || || || || || || || | Sbjct 14702 AGAACGGTACATTTGCTTCACCAGCAACTGAACGCGCAAGAAGTGTTTTACCAGTACCTG 14643 Query 11151 GTTTCCCTGCGAGAAGGGCACCACGTGGGAT 11181 | || | ||||| ||||||| || || Sbjct 14642 GAGGTCCAACAAGAAGCACACCACGAGGAAT 14612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597348134214560