Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1 196 6e-45 seq207 138 1e-27 seq115 122 1e-22 seq244 105 8e-18 seq5 96.9 4e-15 seq337 86.0 8e-12 seq566 82.4 9e-11 >seq1 Length=7344524 Score = 196 bits (216), Expect = 6e-45 Identities = 1090/1725 (63%), Gaps = 26/1725 (2%) Strand=Plus/Minus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 || ||||||||||| || || ||||| || |||| |||||| || | ||||| || ||| Sbjct 2686707 CGCAGGTAGTACATGCCTGTTTTGAGGCCTTGCTCCCAGGCGTAGAAGTGCATCGACGAC 2686648 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | |||| | ||||| | | | |||||||||||||| ||| ||| |||| | Sbjct 2686647 AGCTTGCCAAAGGTTGGGTTCTGTACAAAGAGGTTCATACTCTGGCTCTGACAGATGTAT 2686588 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTG 115737 ||||| || || |||||||| || | | | |||||||||| || || || Sbjct 2686587 GCACCCCGGTCGGCAGCCATATCGATAATGACGCGCTGGCTGATTTCCCATACCGTCTTG 2686528 Query 115738 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTG 115797 || || | ||| | || | || ||||| | | | || || || || || Sbjct 2686527 TACAGATCCTTTAATTCTTGAGGAATATCGTCAAAGCTCTGAATCGAACCGTTGGCGGCC 2686468 Query 115798 ACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGG 115857 | || | | | ||||||||| | ||| | || | || | ||| || ||| Sbjct 2686467 ATCAGGCGGTGCTTCATATCGTCGTTCCACAAGCCCAGACGGTTCAAATCGCGCAGCAGG 2686408 Query 115858 TGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTG 115917 ||||| || || | || || ||||| | || || || | ||||| ||| | ||| Sbjct 2686407 TGCTTGTTCACGATTACGAATTCACCAGAAAGCGTACGGCGGCTGTAGATATTGCTGGTG 2686348 Query 115918 TATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGT 115977 |||||||| || || || ||||| |||| ||| || | || || || || ||||| || Sbjct 2686347 TATGGCTCGAAACATTCGTTGTTGCCCAGGATCTGAGAGGTAGAAGCAGTTGGCATTGGC 2686288 Query 115978 GCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAG 116037 || | || | ||||||||| || || | | ||||| | ||| || || |||| Sbjct 2686287 GCTACCAGCAAGCTGTTGCGCAGGCCATTCTTCTTAATGTCCTTCTTCAGCTCGGCCCAA 2686228 Query 116038 TCGTA--GTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACG 116095 || | ||| |||| | || | | ||||||||||| |||| || | ||| | | | Sbjct 2686227 TCCCAACGTT-CGCTTGGCGTCACAC-CCCACATATCATACTGCAGTACACCCTCGCTGG 2686170 Query 116096 CTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCT 116155 |||| || |||| | | |||| || | || | | | |||| | |||| || Sbjct 2686169 CTGGTGAGCCCTTATAACTCTCGTAAGTACCTTGCTCTTTGGCCAGGGCACAGCTTTCCG 2686110 Query 116156 CGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTC-ATTGCCTTGGCCTCGTCG 116214 ||||| || | || || |||||||||||| ||| |||| | | ||||| ||| Sbjct 2686109 TCAGGGCCGCATAGTAGATGGTCTCAAAAATGTCTTTGTTCAATTGGCGT-GCCTCCTCG 2686051 Query 116215 GAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCA 116274 |||||| | | || |||||| || ||||||| | ||| || ||||| | || Sbjct 2686050 CTATCAAATGGGTAGCGCATCAAAATGAAGGCATCCGCCAAACCCTGTACACCCAAACCG 2685991 Query 116275 ATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCG 116334 ||||||||||| | ||||||| || || || ||| | || || | || ||||| Sbjct 2685990 ATTGGGCGATGACGCATATTACTATTGCGTGCCTCCTCAATAGGGTAGTAGTTGATATCG 2685931 Query 116335 ATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCA 116394 |||||| | || || || ||| || | || | ||| | || || | || Sbjct 2685930 ATAACCTTGTTCAGGTTGCGGGTCACGATACGGGTTACTTCGTACAGGCGCTCAAAGTCG 2685871 Query 116395 AAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACA 116454 || ||| ||||| || || || ||| || || | ||| || ||||| || Sbjct 2685870 TAAGTGC---CGTCTTCTTTTACGTATTTACCCAGTGCCAAACTCGCGAGGTTACATACC 2685814 Query 116455 GAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATG 116514 | ||||| |||||||||| || || || ||||| | ||||| || ||| Sbjct 2685813 GCTACTTCATCAGGTGCAGTGTACTCGATGATCTCGGTACAAAGGTTTGAGCTGCGGATG 2685754 Query 116515 GTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGC 116574 || |||| ||||| || || ||| ||| |||||||||||| || ||||| || Sbjct 2685753 GTACCCAGGTTCTGCTGGTTGCTCTTGCGGTTGGCCGCATCCTTGTAAAGGATATACGGT 2685694 Query 116575 GTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGCTGGCAC--AG 116632 || || || || | ||| | | |||||| ||| | ||| ||| || Sbjct 2685693 GTACCGGTTTCGATCTGGCTTTCCAAAATAGCGAACCACAAATCTTGTGCTTTTACCACT 2685634 Query 116633 TGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCA 116692 | ||| ||| || ||||||| ||||||||| ||||| || || ||||| ||| Sbjct 2685633 TTGCG--GGCACGACCCTCCTGCTCGTACTTATGATAGAGTGCTTCGAACTCGCCACTGT 2685576 Query 116693 CAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCT 116752 | || | || ||||| | || ||| ||| || ||||| | || || | Sbjct 2685575 GTACGTCAAACAGATTCGGTGCTTCATTCGGATCGAACAGCGACCAGTCGCCGTTTTCTT 2685516 Query 116753 CAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAG 116812 || || |||||| | || || ||||| | || |||| | || ||| ||| Sbjct 2685515 TCACGCGGCGCATGAACAAATCCGGAATCCACATAGCGTAGAACAAGTCACGAGCGCGCA 2685456 Query 116813 CTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACG 116872 ||||| | || || || || |||| ||||| | | ||| |||||||| | Sbjct 2685455 ACTCTTCCTTACCGTGGTTTTTCTTCAGTTCCAGGAAGTCGAATACATCTGCGTGCCAGG 2685396 Query 116873 GTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGCCTGGTTTACATACCTCG 116929 | |||||||| | |||| | || || || || |||| |||||| || || | | Sbjct 2685395 GCTCCAGGTAAATAGCGAAGGCACCTTTACGCTTACCACCACCCTGGTCAACGTAGCGGG 2685336 Query 116930 CCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTG-GCCATTTGT-CCC 116987 | || |||| ||||| | ||| || | ||||| | | | | || ||| || Sbjct 2685335 CAGTGTCGTTGAATACTTTCAACATCGGTACAATACCGT-TGCTGGTACCGCCTGTACCT 2685277 Query 116988 CCGAATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCA 117047 || | || || || | || | || ||| || ||||||||| || ||| | Sbjct 2685276 TTGATGTAGCTAC-CCTTAGCCCGGATGTTATGAATGCTCAAACCAATACCACCAGCCGA 2685218 Query 117048 CTTTGAGATTTGTGCGCACTCCG--TGAGACTGCCGTAGATCCCATCGATCGAGTCACCC 117105 | || || || |||||| || ||| | || | || || || || || Sbjct 2685217 C--TGGGAAATGCGCGCACAGCGGTCGAGGGTTTCGAAAATACCGGGAATGCTATCTTCC 2685160 Query 117106 TTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGG 117165 | | | | |||||||||||||||| |||||| | |||||| | || || |||||| Sbjct 2685159 GTCATCGACAAAAGGAAGCAGCTCGACAATTGTGGGCGTGGTGTGGCCGCATTAAAGAGG 2685100 Query 117166 GTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACAGA 117224 || || || |||||||| ||| || | || |||||| | || ||||||| ||| Sbjct 2685099 GTAGGAGTAGCGTGGATAAAC-CACTTCTGAGACATCAGGTTATACGTCTCCAGCACACT 2685041 Query 117225 GGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACAT 117269 ||| ||| ||||| || || | | || ||||| ||||| Sbjct 2685040 CTCAATATCTGTTCCGTGGATGCCTACCGCAACGCGCATCAACAT 2684996 Score = 134 bits (148), Expect = 2e-26 Identities = 346/520 (67%), Gaps = 13/520 (3%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| | |||||| |||||| ||| | ||||| ||||||| |||||| Sbjct 2684062 GCAAAGTCACAGTGCATACCCTCATCACGGCTGATCAACTCATTAGAGAAGCTCAGACCC 2684003 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| | ||| ||||||||||||||||| |||| ||| || || ||||| |||||||| Sbjct 2684002 GGCATCAAACCACGCTTCTTCAACCAGAAGATCGAACAGAACGAACCAGAAAAGAAGATA 2683943 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAAC 127699 |||||||| || || || | || ||||| || ||||| | | | | |||| | Sbjct 2683942 CCCTCCACTGCTGCAAAGGCGATGAGGCGCTCAGCGAAGGAAC----CAT--TCTCAATC 2683889 Query 127700 CACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAG 127759 || || ||||||| || ||||||| | || | ||||| ||| || | || Sbjct 2683888 CAACGCAAGGCCCACTCCGCTTTTTTCTTTACGCAGTCCAGGGTCTCGATGGCGTTGAAC 2683829 Query 127760 AGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCG 127819 || | | ||||| || ||||| || || | || ||||| || || || || Sbjct 2683828 AGGTAGTCTTTTTCCTTTGTGTCTTTAATATAGGTGTCGATGAGCAGGGAGTAAGTCTCC 2683769 Query 127820 CCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTAT-CT 127877 ||||| | | ||| || | |||| | ||||||| | || || | ||| || Sbjct 2683768 GAGTGGATATTCTCCATCAT-GATCTGAAAGCCGTAGAAGAATTTGGCCTC-CGTATACT 2683711 Query 127878 GTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAA 127937 ||||||| | |||| || | | ||||| || || || || || | |||| Sbjct 2683710 GTACCTCGGCTACAAAGTTCTCCGCCAGGTTCTCGTTTACGATCCCGTCAGAGGCCGCAA 2683651 Query 127938 AAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAG---GGTCTTCCAGT 127994 |||| ||||| | || |||||||| | | |||| ||||| || | | ||||| | Sbjct 2683650 AAAAGGCCAGTACATGTTTTATGAAGTGACGCTCATCGTCGTTTAGTTTGCTATTCCAAT 2683591 Query 127995 CGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 || || || | || || | ||||||||||||||| Sbjct 2683590 CGGTCAGGTCTTGGCTCAGGTCAATCTCCTCCGCAGTCCA 2683551 Score = 87.8 bits (96), Expect = 2e-12 Identities = 249/379 (66%), Gaps = 4/379 (1%) Strand=Plus/Plus Query 10441 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCACAAAATGAGGAG 10500 || || || ||| |||||||| ||| ||||| || | | || || ||||| | Sbjct 6543102 TACCAGGCTTCTACCTCGGAGCTGTACGGTAAGGTGCAGCAGATTCCGCAGGATGAGAAT 6543161 Query 10501 ACGCCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGTG 10560 ||||| || |||||||| || ||||| || | || | || | ||| | | Sbjct 6543162 ACGCCTTTTTATCCACGTTCACCCTATGCGGTGGCTAAATTGTACGCGTACTGGATTACG 6543221 Query 10561 AAGAATTATCGCGAATCCTATGGTCTCTTTGTGTGCTCCGGTATTCTCTTCAACCACGAG 10620 |||||||||||||| |||||| | | | ||| ||| || ||||||||||||||| Sbjct 6543222 GTCAATTATCGCGAATCTTATGGTATGTACGCCTGCAACGGAATCCTCTTCAACCACGAG 6543281 Query 10621 TCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACC-GA-TGGTATCAAACAAA 10678 || | |||||| ||||||||| | ||||| ||| || || ||| ||| Sbjct 6543282 AGCCCACTGCGTGGCGAAACTTTCGTGACCAGAAAGATTACCAGAGCCGTGGCAA--AAA 6543339 Query 10679 TCGTGGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTGGG 10738 | ||| ||| | ||| || | | |||| || | | ||| || | ||||||| Sbjct 6543340 TTGTGCTGGGCCTGCAGGATGTCGTCTACCTGGGTAATATGGATGCCAAGCGCGACTGGG 6543399 Query 10739 GACACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTCCAACAAGAAGAGGCGGACG 10798 | |||||| ||||| || || | ||||||| | | || ||||| || |||| | | Sbjct 6543400 GCCACGCCCGTGACTACGTGGAGGGAATGTGGCGCATGCTGCAACAGGACCAGGCCGTAG 6543459 Query 10799 AATATGTCGTCGCGACGGG 10817 | ||||| | || ||||| Sbjct 6543460 ATTATGTGCTGGCTACGGG 6543478 >seq207 Length=238886 Score = 138 bits (152), Expect = 1e-27 Identities = 278/410 (68%), Gaps = 12/410 (3%) Strand=Plus/Minus Query 12702 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 12761 || || ||||| || |||||||| ||||||||||| ||||| || || ||||| || || Sbjct 185482 CGGTCGAAGCGGCCGGGGCGGAGCAGGGCGTCGTCGAGGATGTCGATACGGTTGGTGGCA 185423 Query 12762 GCGATGACAACGATGCCCGTCTCGTTATCGAAGCCATCCATCTCAGTCAAGAG---TTGA 12818 || ||||| | | ||||| | | ||||||| |||||||| || ||| || Sbjct 185422 GCCATGACGATCACGCCCGGGTTGCCCACGAAGCCGTCCATCTC---CACGAGCATCTGG 185366 Query 12819 TTGATGGTTTGTTCACGTTCATCATT---CGCGGGCATACCACCCGCACTGCGTTGCTTA 12875 || | || || ||||| || || || ||| ||| || | | ||| ||| Sbjct 185365 TTCAGCGTCTGCTCACGCTCGTCGTTGCCACCGGCCATGCCGC---TGCCGCGCTGCCGG 185309 Query 12876 CCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAACTTCA 12935 ||||||||||| || ||||| ||||| | ||| ||||| || || || || Sbjct 185308 CCGACGGCGTCGATCTCGTCGATGAAGATGATGCACGGCGAGTTCTCTTTCGCCTTGTCG 185249 Query 12936 AAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCG 12995 || | || ||||| | | |||||| || ||||| |||||||| || || | || || Sbjct 185248 AACAAGTCGCGCACACGCGCGGCACCTACGCCCACGAACATCTCAACGAACTCGGACCCG 185189 Query 12996 GAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTC 13055 ||| |||||| ||| || || || |||| ||| ||||||| ||| ||||| Sbjct 185188 GAAGTGGCGATGAACGGGCACCCGGCCTCGCCGGCGACGGCACGGGCGATGAGAGTCTTA 185129 Query 13056 CCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACC 13105 ||||| || || |||| |||||| | || || |||||| |||| || Sbjct 185128 CCCGTTCCGGGAGGCCCCTCGAGAATCACGCCGCGAGGGATCTTGGCGCC 185079 >seq115 Length=378902 Score = 122 bits (134), Expect = 1e-22 Identities = 117/150 (78%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||| || |||||||| ||| |||||| || |||||||||||||| || ||||| || || Sbjct 238450 GTGCAGGCCCTCGTCGCGGCTGATGAGCTCGTTCGAGAAGCACAGGCCGGGCATCAGGCC 238391 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 ||||| || | |||||| | || || || ||| ||||||||||| |||||||| Sbjct 238390 GCGCTTTTTGAGCCAGAAGACGGCGCAGAAGCTGCCGGAGAAGAAGATGCCCTCCACGGC 238331 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGA 127680 ||||||||||| || ||||| || ||||| Sbjct 238330 CGCGAACGCAACGAGCCGCTCCGCGAAGGA 238301 >seq244 Length=185980 Score = 105 bits (116), Expect = 8e-18 Identities = 367/561 (65%), Gaps = 20/561 (4%) Strand=Plus/Plus Query 12639 CGGGCGTGGACACCCAAAATCTTCTCGC-GTCCGCGCACACTGGGTAGGGACACGGTGAT 12697 |||||||| || || |||||||||| | || | | |||| || |||||||| Sbjct 158934 CGGGCGTGAACCGACAGGATCTTCTCGCGGCCCTTGATGTCGGGGTTCGG-CACGGTGAC 158992 Query 12698 CTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGT 12757 || ||| || || || || || || || || ||| ||| || | || ||||| || Sbjct 158993 CTGACGGTCGAAACGGCCGGGACGCAGCAGCGCGGGGTCCAGAACGTCGCGACGGTTGGT 159052 Query 12758 CGCCGCGATGACAACGATGCCCGTCTCGTT---ATCGAAGCCATCCATCTCAGTCAAGAG 12814 || || | | | |||| | |||||| || || || ||||| || || || Sbjct 159053 GGCGGCCAGG---ATGATGACACCCTCGTTGGCCTCAAACCCGTCCATTTCGACCAGCAG 159109 Query 12815 TTGATTGATGGTTTGTTCACGTTCATCATT--CGCGGGCATACCACCCGCACTGCGTTGC 12872 || || | || ||||| ||||| || || | | | |||| || |||| || || Sbjct 159110 CTGGTTCAGCGTCTGTTCGCGTTCGTCGTTACCACCGCCATA--GCCGGCACCACGATGG 159167 Query 12873 TTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAACT 12932 ||| |||||||| |||||||| ||||| |||||||| ||| || | ||| | Sbjct 159168 CGACCCACGGCGTCGATTTCGTCGATGAAGACGATACAGGGTGCGTTCTTCTTGGCCTGT 159227 Query 12933 TCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCG 12992 || || || || || || | ||||| ||||| || ||||| || || || | | | Sbjct 159228 TCGAACATGTCGCGGACACGGGATGCACCCACACCAACGAACATTTCAACGAAGTCCGAG 159287 Query 12993 GCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGT 13051 | | | || | || |||||| ||| | ||||| |||||||| ||||| || || || Sbjct 159288 CCCG-AGATGGTGAAGAAGGGCACGCCCGCCTCACCAGCGATGGCACGGGCCAGCAGCGT 159346 Query 13052 CTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACC---ACT 13108 ||| || || || || || | ||||| || || |||||| || | || || Sbjct 159347 CTTACCGGTGCCCGGAGGGCCAACCAGAAGCGCGCCTTTGGGGATCTTGCCGCCGAGACG 159406 Query 13109 TCCAAAGTAGCGCTCGGGTTGTTTAAGAAAGTCCACGATTTCTTCCAATTCATCCTTCGC 13168 | || | | ||||||| || || || ||||| ||||||| || ||||| || Sbjct 159407 GCTGAACTTCTG--CGGGTTG-CGCAGGAATTCGACGATCTCTTCCAGCTCTTCCTTGGC 159463 Query 13169 GGCGTCGATGCCTTCAACGTC 13189 |||||||||| | ||||| Sbjct 159464 TTCGTCGATGCCGGCGACGTC 159484 >seq5 Length=3486096 Score = 96.9 bits (106), Expect = 4e-15 Identities = 250/374 (67%), Gaps = 18/374 (5%) Strand=Plus/Minus Query 12702 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 12761 |||||||| || || ||||| | | || ||||| | || ||||| ||||| Sbjct 1077581 CGATCAAAACGGCCAGGGCGCAATAAAGCACGATCAAGTACGTCTGGACGGTTGGTCGCA 1077522 Query 12762 GCGATGACAACGATGCCCGTCTCGTTA---TCGAAGCCATCCATCTCAGTCAAGAGTTGA 12818 ||||| |||| | ||| |||||| || || |||||||||||| || | ||| Sbjct 1077521 GCGATCACAATCACGCCT---TCGTTACCTTCAAACCCATCCATCTCAACCAGCATTTGG 1077465 Query 12819 TTGATGGTTTGTTCACGTTCATCATT--CGCGGGCATACCACCCGCACTGCGTTGCTTAC 12876 |||| ||||| || || |||||||| ||| |||| ||| | | || || | | Sbjct 1077464 TTGAGCGTTTGCTCCCGCTCATCATTGCCGCCACCATA--ACCGCCGCCACGGTGTCTGC 1077407 Query 12877 CGACGGCGTCAATTTCGTCAATGAAAACGATACA---CGGTTGATTTTCACGGGCAACTT 12933 | || |||||||||||||| || |||| ||||| || || |||| ||| | Sbjct 1077406 CAACAGCGTCAATTTCGTCGATAAAAATAATACAGGGCGCCTGTTTTT---TGGCCTGAT 1077350 Query 12934 CAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAAT-TGGCG 12992 | || || || ||||| | |||| || || || |||||||| || || |||| | | Sbjct 1077349 CGAACATGTCGCGCACGCGGCTGGCGCCAACGCCAACAAACATTTCAACGAAATCAGACC 1077290 Query 12993 GCGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTC 13052 || | | | || ||| || || |||| |||||| ||||| ||| ||| | | ||| Sbjct 1077289 CCGATATAGT-GAAGAATGGTACCTTGGCTTCACCGGCGATCGCTTTGGCCATCAAGGTT 1077231 Query 13053 TTCCCCGTCCCTGG 13066 || || || || || Sbjct 1077230 TTACCTGTTCCAGG 1077217 >seq337 Length=117279 Score = 86.0 bits (94), Expect = 8e-12 Identities = 157/229 (69%), Gaps = 1/229 (0%) Strand=Plus/Minus Query 117062 CGCAC-TCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGG 117120 ||||| | | |||| || |||| ||||| | ||| ||| |||| | | || ||| Sbjct 20485 CGCACCTGCTTGAGCGTGTCGTATATCCCGTTGATGCTGTCCTCCTTCATGGTGAGCAGG 20426 Query 117121 AAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGG 117180 |||||||| ||||| || ||| | || || || |||||||| || || ||||| ||||| Sbjct 20425 AAGCAGCTGGACATCTGCGGCTTGGGCGTGCCGGCGTTGAACAGCGTCGGTGTTGCGTGC 20366 Query 117181 ATGAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCG 117240 |||| | | || ||||| ||||| ||||| | || | ||||| ||| | Sbjct 20365 GTGAAGAGCCTCTGCGACATGAGGTCGTACGTCTCGATCACCTTGTCGATGTCGTCCTTG 20306 Query 117241 TGAATACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCA 117289 || || || | || || ||||| | ||||| || || |||||| || Sbjct 20305 TGGATGCCCACCGACACGCGCATGATCATGTGCTGCGGCCTTTCCACCA 20257 >seq566 Length=34611 Score = 82.4 bits (90), Expect = 9e-11 Identities = 297/451 (66%), Gaps = 14/451 (3%) Strand=Plus/Minus Query 12653 CAAAATCTTCTCGCGTCCGCGCACA-CTGGGTAGGGACACGGTGATCTTACGATCAAAGC 12711 |||||||| ||| || |||| || | | || | || || || || ||| ||||| | Sbjct 15055 CAAAATCTGCTCACGACCGCTCAAATCAGGATTTGGT-ACAACGACCTGACGGTCAAAAC 14997 Query 12712 GACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAA 12771 |||||||||| || | || ||||| | ||| ||||| || ||||| || | || Sbjct 14996 GACCTGGGCGCAGCAATGCTGGATCAAGCACGTCAGGACGGTTGGTAGCCGCAATAAGAA 14937 Query 12772 CGATGCCCGTC--TCGTTATCGAAGCCATCCATCTCAGTCAAG-AGTTGATTGATGGTTT 12828 ||| | || ||| | || || |||||||||||| |||| | ||| || | |||| Sbjct 14936 TGATACTT-TCATTCGCT-TCAAAACCATCCATCTCA-ACAAGCAATTGGTTCAATGTTT 14880 Query 12829 GTTCACGTTCATCATT--CGCGGGCATACCACCCGCACTGCGTTGCTTACCGACGGCGTC 12886 | ||||| |||||||| | | | | | ||| || | || || ||| || || || Sbjct 14879 GCTCACGCTCATCATTACCACCGCC--AAGACCAGCGCCACGATGACGACCCACAGCATC 14822 Query 12887 AATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAACTTCAAAGATATCTCG 12946 ||| || || || || | ||| || ||| |||| || ||| || || || || Sbjct 14821 AATCTCATCGATAAAGATGATGCAAGGTGAGTTTTTCTTAGCCTGTTCGAACATGTCACG 14762 Query 12947 CACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGAACATTG-GA 13005 ||| | ||||| |||||||| ||||| || ||||| | | | | | |||| | Sbjct 14761 CACACGAGATGCACCCACACCCACGAACATTTCAACAAAGTCAGAACCTG-AGATTGTGT 14703 Query 13006 TGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTG 13065 ||| || || || | |||||| || | | || || || || || || || || |||| Sbjct 14702 AGAACGGTACATTTGCTTCACCAGCAACTGAACGCGCAAGAAGTGTTTTACCAGTACCTG 14643 Query 13066 GTTTCCCCGCGAGAAGGGCACCACGTGGGAT 13096 | || | ||||| ||||||| || || Sbjct 14642 GAGGTCCAACAAGAAGCACACCACGAGGAAT 14612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613501586409120