Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_014461.1 Length=73453 Score E Sequences producing significant alignments: (Bits) Value seq455 86.0 3e-12 seq412 86.0 3e-12 >seq455 Length=62500 Score = 86.0 bits (94), Expect = 3e-12 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 61303 CGTTAGCTCAGTTGGTAGAGCTGCCGACTCTTAATCGGTAGGTCGCAGGTTCAAATCCTG 61362 ||||||||||||||||||||| | |||| |||||| || |||||||||||| ||||||| Sbjct 19134 CGTTAGCTCAGTTGGTAGAGCAACTGACTTTTAATCAGTGGGTCGCAGGTTCGAATCCTG 19075 Query 61363 CACGG 61367 ||||| Sbjct 19074 CACGG 19070 >seq412 Length=80000 Score = 86.0 bits (94), Expect = 3e-12 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 61303 CGTTAGCTCAGTTGGTAGAGCTGCCGACTCTTAATCGGTAGGTCGCAGGTTCAAATCCTG 61362 ||||||||||||||||||||| | |||| |||||| || |||||||||||| ||||||| Sbjct 39641 CGTTAGCTCAGTTGGTAGAGCAACTGACTTTTAATCAGTGGGTCGCAGGTTCGAATCCTG 39582 Query 61363 CACGG 61367 ||||| Sbjct 39581 CACGG 39577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 234922704177128