Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq5 87.8 1e-11 >seq5 Length=3486096 Score = 87.8 bits (96), Expect = 1e-11 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 518167 TTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATT 518226 |||||| |||||||| || | || ||||| ||||| || || ||||| | | || | Sbjct 928146 TTTATCCAGACCATAGGCCAGGGCGGCAGCGGTTGGCTCGTTGATAATACGCTTGACCTC 928087 Query 518227 AAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 518286 ||| || || || | || ||||| || || || || | || |||||||||||||| || Sbjct 928086 AAGGCCGGCGATCTTGCCCGCATCCTTGGTTGCCTGGCGCTGGGAATCGTTAAAATACGC 928027 Query 518287 AGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTT 518346 ||||| || ||||| || || || || || |||| ||| | ||||||| || Sbjct 928026 GGGAACGGTGATAACCGCTTCCGTGACGGTTTCCCCAAGGTAATCTTCCGCCGTTTTCTT 927967 Query 518347 CATTTT 518352 ||| || Sbjct 927966 CATCTT 927961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780786075748792