Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_014660.1 Length=167716 Score E Sequences producing significant alignments: (Bits) Value seq4 91.5 2e-13 seq6 86.0 7e-12 >seq4 Length=3599618 Score = 91.5 bits (100), Expect = 2e-13 Identities = 56/60 (93%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 80422 ACTGGACTCGAACCAGTGACCATCCACTTAGAAGGCGGATGCTCTATCCATCTGAGCTAC 80481 |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||||||| Sbjct 1972951 ACTGGATTCGAACCAGTGACCGTCCGCTTAGAAGGCGGATGCTCTATCCAGCTGAGCTAC 1973010 >seq6 Length=3173221 Score = 86.0 bits (94), Expect = 7e-12 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 80425 GGACTCGAACCAGTGACCATCCACTTAGAAGGCGGATGCTCTATCCATCTGAGCTAC 80481 ||||||||||| | |||||||| |||||||||||||||||||||||| ||||||||| Sbjct 2219878 GGACTCGAACCTGCGACCATCCGCTTAGAAGGCGGATGCTCTATCCAGCTGAGCTAC 2219822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 536558290446720