Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_014663.1 Length=169947 Score E Sequences producing significant alignments: (Bits) Value seq6 86.0 7e-12 >seq6 Length=3173221 Score = 86.0 bits (94), Expect = 7e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 79784 AATTGGCTCCCCGACCACGGTTCGAACGTGGGACAAACAGAGTAACAGTCTGCTGCTCTA 79843 || ||||||||||| | || |||||| | ||||||| || |||||||| | ||||||| Sbjct 3003470 AAGTGGCTCCCCGAGCTGGGCTCGAACCAGCGACAAACGGATTAACAGTCCGTTGCTCTA 3003411 Query 79844 CCAACTGAGCTATCGAGGAA 79863 ||||||||||||||| |||| Sbjct 3003410 CCAACTGAGCTATCGGGGAA 3003391 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 79787 TGGCTCCCCGACCACGGTTCGAACGTGGGACAAACAGAGTAACAGTCTGCTGCTCTACCA 79846 ||||||||||| | || |||||| | ||||||| || |||||||| | |||||||||| Sbjct 3018071 TGGCTCCCCGAGCTGGGCTCGAACCAGCGACAAACGGATTAACAGTCCGTTGCTCTACCA 3018012 Query 79847 ACTGAGCTATCGAGGAA 79863 |||||||||||| |||| Sbjct 3018011 ACTGAGCTATCGGGGAA 3017995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543697425123040