Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1 257 2e-63 seq566 129 7e-25 seq115 109 7e-19 seq2 100 4e-16 seq244 96.9 4e-15 seq337 93.3 5e-14 >seq1 Length=7344524 Score = 257 bits (284), Expect = 2e-63 Identities = 1137/1774 (64%), Gaps = 46/1774 (3%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| | ||||| ||||| || ||| | || ||||| || ||||||||| ||| Sbjct 2684987 CCGCAGCATATGTTGATGCGCGTTGCGGTAGGCATCCACGGAACAGATATTGAGAGTGTG 2685046 Query 111672 TTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 ||||||| || || |||||| | | || ||| |||||||| || || |||||||| Sbjct 2685047 CTGGAGACGTATAACCTGATGTCTCAGAAGTG-GTTTATCCACGCTACTCCTACCCTCTT 2685105 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 || || | |||||| | || ||| |||| || || |||||| | | | | ||| || Sbjct 2685106 TAATGCGGCCACACCACGCCCACAATTGTCGAGCTGCTTCCTTTTGTCGATGACGGAAGA 2685165 Query 111791 TTCAATCAATGGCATTTACGGCACTCTC-ACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849 | || || |||| || || ||| || | ||||| | || || ||| ||||| Sbjct 2685166 TAGCATTCCCGGTATTTTCGAAACCCTCGACCGC-TGTGCGCGCATTTCCCAGTCGGCTG 2685224 Query 111850 GTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTC-GTATTAGAGGTACA 111908 ||||||| || || ||| ||| | || | || || || | || | ||||||| Sbjct 2685225 GTGGTATTGGTTTGAGCATTCATAACATCCGGGCTAA-GGGTAGCTACATCAAAGGTACA 2685283 Query 111909 AATGGT-CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967 ||| | | || | |||||| | || ||| | ||||| |||| ||| || ||||| Sbjct 2685284 GGCGGTACCAGCA-ACGGTATTGTACCGATGTTGAAAGTATTCAACGACACTGCCCGCTA 2685342 Query 111968 TGTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 112024 || |||| | ||| || || || || | |||| | || || ||||| ||||| Sbjct 2685343 CGTTGACCAGGGTGGTGGTAAGCGTAAAGGTGCCTTCGCTATTTACCTGGAGCCCTGGCA 2685402 Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAG--GCGCGG 112082 ||| ||| | | || ||||| || || ||||| ||| | || ||| ||||| Sbjct 2685403 CGCAGATGTATTCGACTTCCTGGAACTGAAGAAAAACCACGGTAAGGAAGAGTTGCGCGC 2685462 Query 112083 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 112142 | || || | |||| |||| | |||||||| ||| | |||||| | || | || Sbjct 2685463 T--CGTGACTTGTTCTACGCTATGTGGATTCCGGATTTGTTCATGCGCCGCGTGAAAGAA 2685520 Query 112143 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGT 112202 | ||| | ||||| || || ||| | | ||||| ||| | || | || Sbjct 2685521 AACGGCGACTGGTCGCTGTTCGATCCGAATGAAGCACCGAATCTGTTTGACGTACACAGT 2685580 Query 112203 GAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGA--CGG 112260 | ||||| ||||| ||||| ||||||||| | || |||| || | || | || Sbjct 2685581 GGCGAGTTCGAAGCACTCTATCATAAGTACGAGCAGGAGGGTCGTGC--CCGCAAAGTGG 2685638 Query 112261 TGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320 | ||| ||| ||||| |||||| | | || | ||| || |||||||| | Sbjct 2685639 TAAAAGCACAAGATTTGTGGTTCGCTATTTTGGAAAGCCAGATCGAAACCGGTACACCGT 2685698 Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380 |||| |||||||| || || |||| ||||| || || |||| ||||| ||| Sbjct 2685699 ATATCCTTTACAAGGATGCGGCCAACCGCAAGAGCAACCAGCAGAACCTGGGTACCATCC 2685758 Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440 || || ||||| ||||| || ||| | || | || | ||||| || || | Sbjct 2685759 GCAGCTCAAACCTTTGTACCGAGATCATCGAGTACACTGCACCTGATGAAGTAGCGGTAT 2685818 Query 112441 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT--GA 112498 |||||||||| | || || || || || | ||| | | || || || Sbjct 2685819 GTAACCTCGCGAGTTTGGCACTGGGTAAATACGT-----AAAAGAAGACGGCACTTACGA 2685873 Query 112499 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGA 112558 | ||| || ||||||| || | || || ||||| |||| ||||| || Sbjct 2685874 CTTTGAGCGCCTGTACGAAGTAACCCGTATCGTGACCCGCAACCTGAACAAGGTTATCGA 2685933 Query 112559 TAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGG 112618 || || | ||||| ||||| || || || ||||||| | || || ||||| || Sbjct 2685934 TATCAACTACTACCCTATTGAGGAGGCACGCAATAGTAATATGCGTCATCGCCCAATCGG 2685993 Query 112619 TCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGA 112678 | | ||||| || ||| | ||||||| |||||| | ||| || |||||||| ||| Sbjct 2685994 TTTGGGTGTACAGGGTTTGGCGGATGCCTTCATTTTGATGCGCTACCCATTTGATAGCGA 2686053 Query 112679 CGAAGCGAAGGAAAT----CAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTG 112734 || || | | ||| ||| | || |||||||| || || | || || || Sbjct 2686054 GGAGGC-ACGCCAATTGAACAAAG---ACATTTTTGAGACCATCTACTATGCGGCCCTGA 2686109 Query 112735 AGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAG 112794 || || | | |||| | | | ||| | || || | | | |||| || |||| Sbjct 2686110 CGGAAAGCTGTGCCCTGGCCAAAGAGCAAGGTACTTACGAGAGTTATAAGGGCTCACCAG 2686169 Query 112795 CTTCA-CAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACG 112851 | || | |||| || || || | ||||||||||| |||| |||||| | | | Sbjct 2686170 C--CAGCGAGGGTGTACTGCAGTATGATATGTGGG-GTGTGACGCCAAGCGAACGTTGGG 2686226 Query 112852 ACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGG 112911 | |||| || || ||| | ||| ||| |||| || || || ||||| | || | | Sbjct 2686227 ATTGGGCCGAGCTGAAGAAGGACATTAAGAAGAATGGCCTGCGCAACAGCTTGCTGGTAG 2686286 Query 112912 CACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCT 112971 | ||||||||||| || || ||| | || ||| |||| || || ||||| || || || | Sbjct 2686287 CGCCAATGCCAACTGCTTCTACCTCTCAGATCCTGGGCAACAACGAATGTTTCGAGCCAT 2686346 Query 112972 ACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGC 113031 |||| | || ||||| | | || || | || || || || || || ||||||| Sbjct 2686347 ACACCAGCAATATCTACAGCCGCCGTACGCTTTCTGGTGAATTCGTAATCGTGAACAAGC 2686406 Query 113032 ATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGG 113091 | || || || | || | || | ||| | | ||||||||| | | | || Sbjct 2686407 ACCTGCTGCGCGATTTGAACCGTCTGGGCTTGTGGAACGACGATATGAAGCACCGCCTGA 2686466 Query 113092 TGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGT 113151 || || ||||| ||||| | ||| |||||||| | ||| | ||| | ||| Sbjct 2686467 TGGCCGCCAACGGTTCGATTCAGAGCTTTGACGATATTCCTCAAGAATTAAAGGATCTGT 2686526 Query 113152 ACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATT---GACATGGCCGCAGATCGTG 113208 || || || ||||||||| | || |||||| || ||||| || || || | Sbjct 2686527 ACAAGACGGTATGGGAAATC---AGCCAGCGCGTCATTATCGATATGGCTGCCGACCGGG 2686583 Query 113209 GTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCA 113268 || | ||| ||| || || |||||||| || || | | | ||||| | || Sbjct 2686584 GTGCATACATCTGTCAGAGCCAGAGTATGAACCTCTTTGTACAGAACCCAACCTTTGGCA 2686643 Query 113269 AGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACC 113328 |||| || || |||||| | ||| ||| || | || |||||||| || ||||| |||| Sbjct 2686644 AGCTGTCGTCGATGCACTTCTACGCCTGGGAGCAAGGCCTCAAAACAGGCATGTACTACC 2686703 Query 113329 TCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTT 113362 | || ||| ||| | | ||||||| |||| Sbjct 2686704 TGCGTAGTAAAGCAGCTGTGAACCCAATTAAGTT 2686737 Score = 116 bits (128), Expect = 5e-21 Identities = 150/206 (73%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 102126 AAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGA 102185 || |||||||| ||||| || ||| |||| | | | ||||||| |||||||| Sbjct 2683863 AAAAAAGCGGAGTGGGCCTTGCGTTGGATTGAGA--ATG----GTTCCTTCGCTGAGCGC 2683916 Query 102186 CTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTAT 102245 ||| |||| ||||| || |||||||||||||| |||||||| ||||| | || | Sbjct 2683917 CTCATCGCCTTTGCAGCAGTGGAGGGTATCTTCTTTTCTGGTTCGTTCTGTTCGATCTTC 2683976 Query 102246 TGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGT 102305 ||| | |||||||| ||| | ||||| ||||| ||||||| || ||| | ||| ||| Sbjct 2683977 TGGTTGAAGAAGCGTGGTTTGATGCCGGGTCTGAGCTTCTCTAATGAGTTGATCAGCCGT 2684036 Query 102306 GACGAGGGACTCCACCAAGAGTTTGC 102331 || ||||| | ||| || ||||| Sbjct 2684037 GATGAGGGTATGCACTGTGACTTTGC 2684062 Score = 95.1 bits (104), Expect = 2e-14 Identities = 212/316 (67%), Gaps = 2/316 (1%) Strand=Plus/Minus Query 16065 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 16124 || |||||||| || ||||||||||| || || || || ||||| | |||||| Sbjct 4382105 GCGTCAATCTCGTCGATGAAGACGATACAAGGAGCCTTCTCACGAGCCTGCTTAAAGAGG 4382046 Query 16125 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACAT 16184 || ||||| ||| ||| || || || |||||||||||||| |||| || | | | || Sbjct 4382045 TCACGTACCCGCGAGGCACCTACCCCCACAAACATCTCCACGAAGTCTGAACCAG-AGAT 4381987 Query 16185 TG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 16243 | || |||||| ||| | |||||| || | ||| || || | |||||||| || Sbjct 4381986 GGAGAAGAAGGGAACAGCTGCTTCACCAGCCACTGCTTTAGCCAGCAAGGTCTTACCAGT 4381927 Query 16244 ACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAGTATCT 16303 || || || | || | |||| || ||||| | || | || |||| | Sbjct 4381926 TCCCGGAGGGCCTACCAGCAAAACACCCTTAGGGATCTTACCACCCAGTGCAGTGTATTT 4381867 Query 16304 CTCAGGTTGCTTAAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGGCGTCAATCCC 16363 | ||| | |||||| || || || ||||| | ||| || ||||| |||| | || Sbjct 4381866 TTTAGGATTCTTAAGGAAGTCAACGATCTCCATTACTTCTTCCTTGGCTTCGTCCAGGCC 4381807 Query 16364 CTCAACATCGGTAAAC 16379 ||||||||| |||| Sbjct 4381806 AGCAACATCGGCAAAC 4381791 Score = 82.4 bits (90), Expect = 9e-11 Identities = 259/391 (66%), Gaps = 14/391 (4%) Strand=Plus/Plus Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651 |||| |||| || || ||| | || ||| ||| |||||||| || || || || | Sbjct 6543095 CCGCTTCTACCAGGCTTCTACCTCGGAGCTGTACGGTAAGGTGCAGCAGATTCCGCAGGA 6543154 Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTA--CGGAGTCTCAAAGGTTGCGGCACAT 13709 ||| | || || || || ||||| || ||| ||| | || || || | || Sbjct 6543155 TGAGAATACGCCTTTTTATCCACGTTCACCCTATGCGGTGGCTAAATTGTACGCGTAC-- 6543212 Query 13710 TGGCTCGTAAAG--AATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCT 13767 ||| | || | ||||| ||||| ||||| || ||| || ||| ||||||||||| Sbjct 6543213 TGGAT--TACGGTCAATTATCGCGAATCTTATGGTATGTACGCCTGCAACGGAATCCTCT 6543270 Query 13768 TCAACCATGAATCACCGAGACGAGGTGCAGACTTT-GTGACCATGAAGATTACC-GAG-G 13824 ||||||| || || || || | | ||||| ||||||| ||||||||| ||| Sbjct 6543271 TCAACCACGAGAGCCCACTGCGTGGCG-AAACTTTCGTGACCAGAAAGATTACCAGAGCC 6543329 Query 13825 GTATCAAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGG 13884 || ||| |||| || ||| |||| || | | ||||||| || | || Sbjct 6543330 GTGGCAA--AAATTGTGCTGGGCCTGCAGGATGTCGTCTACCTGGGTAATATGGATGCCA 6543387 Query 13885 AGAGAGATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAG 13944 || | || ||||| ||||| ||||| || || | ||||||| |||||| ||||| | Sbjct 6543388 AGCGCGACTGGGGCCACGCCCGTGACTACGTGGAGGGAATGTGGCGCATGCTGCAACAGG 6543447 Query 13945 AGGAAGCCGACGAATATGTAGTAGCAACGGG 13975 | | |||| || ||||| | || ||||| Sbjct 6543448 ACCAGGCCGTAGATTATGTGCTGGCTACGGG 6543478 >seq566 Length=34611 Score = 129 bits (142), Expect = 7e-25 Identities = 261/379 (69%), Gaps = 14/379 (4%) Strand=Plus/Minus Query 15878 GATCTTACGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATT 15937 || || ||| ||||| ||||||||||| || | || |||||| | ||| || || Sbjct 15013 GACCTGACGGTCAAAACGACCTGGGCGCAGCAATGCTGGATCAAGCACGTCAGGACGGTT 14954 Query 15938 CGTTGCGGCGATGACAACAATACCTGT-TTCGTTATCAAAACCATCCATCTCTGTCAAAA 15996 || || || || | || |||| | |||| | ||||||||||||||||| | || Sbjct 14953 GGTAGCCGCAATAAGAATGATACTTTCATTCGCT-TCAAAACCATCCATCTCA---ACAA 14898 Query 15997 GC---TGGTTAATAGTTTGTTCCCGTTCATCATT--CGCTGGCATACCACCAGCACTGCG 16051 || ||||| | ||||| || || |||||||| | | | || |||||| | || Sbjct 14897 GCAATTGGTTCAATGTTTGCTCACGCTCATCATTACCACCGCCAAG--ACCAGCGCCACG 14840 Query 16052 TTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGC 16111 || ||||| |||||||||||||| || |||| |||||| ||| |||| ||| Sbjct 14839 ATGACGACCCACAGCATCAATCTCATCGATAAAGATGATGCAAGGTGAGTTTTTCTTAGC 14780 Query 16112 GACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTT 16171 ||| || | || || ||||| || |||||||| || ||||| || ||||||| Sbjct 14779 CTGTTCGAACATGTCACGCACACGAGATGCACCCACACCCACGAACATTTCAACAAAGTC 14720 Query 16172 TGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAA 16230 | | | | |||| | ||| || ||||| | |||||| |||| | || || |||| Sbjct 14719 AGAACCTG-AGATTGTGTAGAACGGTACATTTGCTTCACCAGCAACTGAACGCGCAAGAA 14661 Query 16231 GAGTCTTACCCGTACCTGG 16249 | || ||||| |||||||| Sbjct 14660 GTGTTTTACCAGTACCTGG 14642 >seq115 Length=378902 Score = 109 bits (120), Expect = 7e-19 Identities = 114/150 (76%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 ||||| || ||||| ||| | || || ||| || ||||| ||||||||||| || | Sbjct 238301 TCCTTCGCGGAGCGGCTCGTTGCGTTCGCGGCCGTGGAGGGCATCTTCTTCTCCGGCAGC 238360 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 |||||||| | | |||||||| ||||| || || ||||| || || |||||||| ||| Sbjct 238361 TTCTGCGCCGTCTTCTGGCTCAAAAAGCGCGGCCTGATGCCCGGCCTGTGCTTCTCGAAC 238420 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 ||||| ||| || |||||||| || ||| Sbjct 238421 GAGCTCATCAGCCGCGACGAGGGCCTGCAC 238450 >seq2 Length=6328565 Score = 100 bits (110), Expect = 4e-16 Identities = 272/406 (67%), Gaps = 8/406 (2%) Strand=Plus/Plus Query 15878 GATCTTACGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATT 15937 ||||| || || ||||| || ||||| || ||||| ||||||| || || || Sbjct 5375526 GATCTGGCGGTCGAAGCGGCCCGGGCGCAGAAGCGCCGGGTCAAGGACGTCCGGACGGTT 5375585 Query 15938 CGTTGCGGCGATGACAACAATACCTGT-TTCGTTATCAAAACCATCCATCTCTGTCAAAA 15996 || || ||||||| | || ||| |||| |||||||||||||| || || | Sbjct 5375586 GGTGGCCGCGATGATGATGATGCCTTCATTCGGC-TCAAAACCATCCATTTCGACCAGCA 5375644 Query 15997 GCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCAT-ACCACCAGCACTGCGTTGC 16055 ||||||| | || || || || || ||||| || | || | ||| || | || || Sbjct 5375645 GCTGGTTGAGCGTCTGCTCGCGCTCGTCATT-GCCGCCACCAAGACCGGCGCCACGATGA 5375703 Query 16056 TTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATT-TTCGCGAGCGAC 16114 || || || || || || || ||||||| |||||| || || ||| | || Sbjct 5375704 CGGCCAACCGCGTCGATTTCGTCGATGAAGATGATGCACGGCGCGTTCTTCTTG-GCCTG 5375762 Query 16115 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGC 16174 ||| || | || || || || |||||||||||| || ||||| || || |||| | Sbjct 5375763 TTCGAACATGTCGCGAACGCGGGAGGCGCCCACACCGACGAACATTTCAACGAAGTCGGA 5375822 Query 16175 GGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAG 16233 ||||| || | || |||||| ||||| | ||||| |||| || || || || | Sbjct 5375823 ACCGGAA-ATCGTGAAGAAGGGCACATTTGCCTCACCGGCAACAGCGCGCGCAGTCAGCG 5375881 Query 16234 TCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAAT 16279 ||||||| ||||| || ||| | || || |||| || ||||| Sbjct 5375882 TCTTACCGGTACCCGGAGGGCCCACAAGAAGCACACCGCGCGGAAT 5375927 Score = 84.2 bits (92), Expect = 3e-11 Identities = 134/188 (71%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 16065 GCATCAATCTCATCAATGAAGACGATGCATGGT--TGATTTTCGCGAGCGACTTCAAAGA 16122 || |||| ||| || ||||||| |||| || || || |||| | ||| || | Sbjct 1094842 GCGTCAAGCTCGTCGATGAAGATGATGGCGGGGGCTGCCTTGCGCGCCTG--TTCGAATA 1094899 Query 16123 GATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAAC 16182 |||| || || || |||||| || || ||||||||||| ||||| | | ||||| Sbjct 1094900 GATCGCGCACGCGTGCGGCGCCGACGCCGACAAACATCTCGACAAATTCGGACCCGGAA- 1094958 Query 16183 ATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCC 16241 || | || |||||| ||| | |||||| |||| ||| |||||||| || || || ||| Sbjct 1094959 ATGGAGAAGAAGGGAACACCGGCTTCACCGGCAACGGCGCGGGCGAGCAGCGTTTTGCCC 1095018 Query 16242 GTACCTGG 16249 || ||||| Sbjct 1095019 GTGCCTGG 1095026 >seq244 Length=185980 Score = 96.9 bits (106), Expect = 4e-15 Identities = 268/399 (67%), Gaps = 14/399 (4%) Strand=Plus/Plus Query 15972 TCAAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATT--CG 16029 ||||| || ||||| || || |||||||| | || ||||| ||||| || || | Sbjct 159084 TCAAACCCGTCCATTTCGACCAGCAGCTGGTTCAGCGTCTGTTCGCGTTCGTCGTTACCA 159143 Query 16030 CTGGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGA 16089 | | |||| | | |||| || || |||||||| || || || || |||||||||| Sbjct 159144 CCGCCATAGC--CGGCACCACGATGGCGACCCACGGCGTCGATTTCGTCGATGAAGACGA 159201 Query 16090 TGCATGGT-TGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACA 16148 | || ||| | | ||| | || ||| || | || || ||||| || |||||| Sbjct 159202 TACAGGGTGCGTTCTTCTTG-GCCTGTTCGAACATGTCGCGGACACGGGATGCACCCACA 159260 Query 16149 CCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTC 16207 ||||| ||||| || || |||| | | | | | || | || |||||| || | || Sbjct 159261 CCAACGAACATTTCAACGAAGTCCGAGCCCG-AGATGGTGAAGAAGGGCACGCCCGCCTC 159319 Query 16208 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 16267 ||| || ||||| ||||| || || |||||||| || || || || | || || || Sbjct 159320 ACCAGCGATGGCACGGGCCAGCAGCGTCTTACCGGTGCCCGGAGGGCCAACCAGAAGCGC 159379 Query 16268 ACCTCGTGGAATCTTGGCGCC---ACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATC 16324 ||| || |||||| |||| || | || | ||| | |||||| || || || Sbjct 159380 GCCTTTGGGGATCTTGCCGCCGAGACGGCTGAACT-TCT-GCGGGTTGC-GCAGGAATTC 159436 Query 16325 CACAATCTCTTCCAATTCATCTTTGGCGGCGTCAATCCC 16363 || |||||||||| || || ||||| |||| || || Sbjct 159437 GACGATCTCTTCCAGCTCTTCCTTGGCTTCGTCGATGCC 159475 >seq337 Length=117279 Score = 93.3 bits (102), Expect = 5e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 111601 TGATGGAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATA 111660 || |||||| || ||| ||||| ||||||| || || | || ||||| ||| || | Sbjct 20257 TGGTGGAAAGGCCGCAGCACATGATCATGCGCGTGTCGGTGGGCATCCACAAGGACGACA 20316 Query 111661 TTGATTCTGTTTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACAC 111720 | || || | ||||| |||||| ||||| | | | |||| |||||||||| Sbjct 20317 TCGACAAGGTGATCGAGACGTACGACCTCATGTCGCAGAGGCTCTTCACGCACGCAACAC 20376 Query 111721 CAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAA 111780 | || || |||||||| || || || | || || |||||||| || ||||| | | | Sbjct 20377 CGACGCTGTTCAACGCCGGCACGCCCAAGCCGCAGATGTCCAGCTGCTTCCTGCTCACCA 20436 Query 111781 ACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCA 111819 |||||||| ||||| || || |||| ||| |||| Sbjct 20437 TGAAGGAGGACAGCATCAACGGGATATACGACACGCTCA 20475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620736720207040