Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1 226 3e-54 seq207 194 2e-44 seq244 156 5e-33 seq566 118 1e-21 seq3 109 6e-19 seq2 84.2 3e-11 seq223 82.4 9e-11 >seq1 Length=7344524 Score = 226 bits (250), Expect = 3e-54 Identities = 1159/1828 (63%), Gaps = 34/1828 (2%) Strand=Plus/Minus Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAG 109467 || || || ||||| || |||||||| || || ||| ||||| | ||||| || || Sbjct 2686707 CGCAGGTAGTACATGCCTGTTTTGAGGCCTTGCTCCCAGGCGTAGAAGTGCATCGACGAC 2686648 Query 109468 AGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAAT 109527 || ||| || || || ||| | ||| | |||||| ||| |||| |||| || Sbjct 2686647 AGCTTGCCAAAGGTTGGGTTCTGTACAAAGAGGTTCATACTCTGGCTCTGACAGATGTAT 2686588 Query 109528 CGACCACGATCAGCCGCCATGTCGATGAT-ACACTTTTGGCTAATTTCCCAGACAGTCTT 109586 ||| || || || ||||| ||||| || || | | |||| |||||||| || ||||| Sbjct 2686587 GCACCCCGGTCGGCAGCCATATCGATAATGACGCGCT-GGCTGATTTCCCATACCGTCTT 2686529 Query 109587 GTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCCTT 109646 ||||| || ||| | || | ||||| || | | | | ||||| || || || Sbjct 2686528 GTACAGATCCTTTAATTCTTGAGGAATATCGTCAAAGCTCTGAATCGAACCGTTGGCGGC 2686469 Query 109647 CACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGTCAACAAG 109706 || || | | | |||||| || | ||| | || | || | |||| | || Sbjct 2686468 CATCAGGCGGTGCTTCATATCGTCGTTCCACAAGCCCAGACGGTTCAAATCGCGCAGCAG 2686409 Query 109707 ATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGT 109766 |||||||| || | || |||||||||| ||| || || ||| |||||| || | || Sbjct 2686408 GTGCTTGTTCACGATTACGAATTCACCAGAAAGCGTACGGCGGCTGTAGATATTGCTGGT 2686349 Query 109767 GTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGG 109826 ||| || |||||||| || |||||||| ||||| || | || ||||| || ||||| || Sbjct 2686348 GTATGGCTCGAAACATTCGTTGTTGCCCAGGATCTGAGAGGTAGAAGCAGTTGGCATTGG 2686289 Query 109827 AGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCA 109886 || | || | ||||| || || || ||| |||| | || || || |||| Sbjct 2686288 CGCTACCAGCAAGCTGTTGCGCAGGCCATTCTTCTTAATGTCCTTCTTCAGCTCGGCCCA 2686229 Query 109887 ATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTC 109946 ||| |||| | || | | |||| | |||||||||| || ||||||||||| Sbjct 2686228 ATCCCAACGTTCGCT-----TGGCGTCAC-ACCCCACATATCATACTGCAGTACACCCTC 2686175 Query 109947 AGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGA 110006 || || || ||||| |||||||||| | || | | | ||||| | | Sbjct 2686174 GCTGGCTGGTGAGCCCTTATAACTCTCGTAAGTACCTTGCTCTTTGGCCAGGGCACAGCT 2686115 Query 110007 AGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTC 110066 || || ||||||| || || ||||||||||| | |||| |||| | ||| Sbjct 2686114 TTCCGTCAGGGCCGCATAGTAGATGGTCTCAAAAATGTCTTTGTTCAATTGGCGTGCCTC 2686055 Query 110067 TTCACAGTCGAA-GGGAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGA 110125 || | || || ||| || || || ||| || ||||||| | |||||| ||||| | Sbjct 2686054 CTCGCTATCAAATGGGTAGCGCATCAA-AATGAAGGCATCCGCCAAACCCTGTACACCCA 2685996 Query 110126 GACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGC 110185 ||| || |||||||| ||| ||| || || || | ||||| ||||| Sbjct 2685995 AACCGATTGGGCGATGACGCATATTACTATTGCGTGCCTCCTCAATAGGGTAGTAGTTGA 2685936 Query 110186 GGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGT 110245 ||||| ||| || || || ||||| | || | ||| | || || Sbjct 2685935 TATCGATAACCTTGTTCAGGTTGCGGGTCACGATACGGGTTACTTCGTACAGGCGCTCAA 2685876 Query 110246 AATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGC 110305 | ||| | || ||||| ||| | || ||||| || || | | ||| || || | Sbjct 2685875 AGTCGTAAGTGC-CGTCTTCTTTT--ACGTATTTACCCAGTGCCAAACTCGCGAGGTTAC 2685819 Query 110306 ACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCT 110365 | || | || || | ||||| || | || || ||||| | ||| || || Sbjct 2685818 ATACCGCTACTTCATCAGGTGCAGTGTACTCGATGATCTCGGTACAAAGGTTTGAGCTGC 2685759 Query 110366 TAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGT 110425 ||| ||||| ||||| ||| || ||| |||| |||||||| || || || | Sbjct 2685758 GGATGGTACCCAGGTTCTGCTGGTTGCTCTTGCGGTTGGCCGCATCCTTGTAAAGGATAT 2685699 Query 110426 ATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGA 110485 | || ||||| ||||| |||| | | ||| || ||| | ||| || | Sbjct 2685698 ACGGTGTACCGGTTTCGATCTGGCTTTCCAAAATAGCGAACCACAAATCTTGTGCTTTTA 2685639 Query 110486 CAG--TTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTG 110543 | ||||| || |||| |||| ||||||||| || | | || || || Sbjct 2685638 CCACTTTGCGG--GCACGACCCTCCTGCTCGTACTTATGATAGAGTGCTTCGAACTCGCC 2685581 Query 110544 TCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACC 110603 | || || ||| | ||| | || | | ||| ||| || ||||| | || Sbjct 2685580 ACTGTGTACGTCAAACAGATTCGGTGCTTCATTCGGATCGAACAGCGACCAGTCGCCGTT 2685521 Query 110604 CTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCA 110663 || | || | |||||||| || ||||||||||| || |||| | |||||| | Sbjct 2685520 TTCTTTCACGCGGCGCATGAACAAATCCGGAATCCACATAGCGTAGAACAAGTCACG--A 2685463 Query 110664 ACGAGC--CTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAG 110721 || || |||||| | ||| ||||| || |||| ||||| | | ||| | | Sbjct 2685462 GCGCGCAACTCTTCCTTACCGTGGTTTTTCTTCAGTTCCAGGAAGTCGAATACATCTGCG 2685403 Query 110722 TGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG---ACGACCCGCCTGGTTAACA 110778 ||||| || || || || | ||||| || || ||||| || ||| |||||| ||| Sbjct 2685402 TGCCAGGGCTCCAGGTAAATAGCGAAGGCACCTTTACGCTTACCACCACCCTGGTCAACG 2685343 Query 110779 TAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTT 110838 ||||| || ||| | ||||| || | | ||| || | ||| || | | ||| | Sbjct 2685342 TAGCGGGCAGTGTCGTTGAATACTTTCAACATCGGTACAATACCGTTGCTGGTACCGCCT 2685283 Query 110839 GTACCCCTAATTCTGGACTTA---TTGGCACGAATGTCGTGGATATGCATACCAATACCA 110895 ||||| | | || | || || || || |||| || || || |||||||||| Sbjct 2685282 GTACCTTTGA---TGTAGCTACCCTTAGCCCGGATGTTATGAATGCTCAAACCAATACCA 2685226 Query 110896 CCCGCCCACTTACTAATTTGTGCACACTCTGT-GAGTGTACCATAAATACCATCAATCGA 110954 || ||| ||| ||| | ||||| | || ||| || | ||||||| ||| Sbjct 2685225 CCAGCCGACTGGGAAATGCGCGCACA-GCGGTCGAGGGTTTCGAAAATACCGGGAATGCT 2685167 Query 110955 ATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATT 111014 |||| || | | | | || ||||| |||| || || || || || ||||||| Sbjct 2685166 ATCTTCCGTCATCGACAAAAGGAAGCAGCTCGACAATTGTGGGCGTGGTGTGGCCGCATT 2685107 Query 111015 GAAGAGTGTAGGTGTCGCATGAATGAACAGACCT-TGGGACATCTTGTTGTATGTGTCGA 111073 ||||| ||||| || || || || ||| || | || |||||| ||| || || || | Sbjct 2685106 AAAGAGGGTAGGAGTAGCGTGGATAAAC-CACTTCTGAGACATCAGGTTATACGTCTCCA 2685048 Query 111074 GTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAG 111133 | | | |||| | ||||| || || | ||||| ||||| ||||||| || | Sbjct 2685047 GCACACTCTCAATATCTGTTCCGTGGATGCCTACCGCAACGCGCATCAACATATGCTGCG 2684988 Query 111134 GCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAACTCTTCTCTAGGGTCTTGAGAC 111193 | || | | ||| |||| | ||| |||||| ||| ||||| |||| | Sbjct 2684987 GACGCTCCACCACCTTGCCATTGGCGCGCATCAGGTAAGAACGCTCCAGGGTTTTGAATC 2684928 Query 111194 CAAAGTATCCAAAATCGAAATCACGATC 111221 | ||| | |||| ||| |||| ||||| Sbjct 2684927 CGAAGAAGTCAAATTCGTAATCGCGATC 2684900 Score = 125 bits (138), Expect = 8e-24 Identities = 334/505 (66%), Gaps = 13/505 (3%) Strand=Plus/Minus Query 11496 AATCTTACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTT 11555 ||||| || |||||||| |||||||| | || || || || | || ||||| Sbjct 4382295 AATCTGGCGGTCGAAACGGCCTGGGCGCAAGAGCGCTGAGTCCAGCACGTCCGGGCGGTT 4382236 Query 11556 TGTAGCGGCAATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAG 11615 || || || || | | | || | || || ||||||||||||||| || | Sbjct 4382235 GGTCGCAGCCATCAGGATTACTCCTTTATCGGTGCTGAAACCGTCCATTTCCACCAGCAA 4382176 Query 11616 CTGGTTGATCGTCTGTTCACGCTCATCGTTG---GAGGGCATACCAC--CTGC--CGAAC 11668 |||||| | || | || || || |||||| | | ||||| | || ||| | Sbjct 4382175 CTGGTTCAGGGTATTCTCGCGTTCGTCGTTGCCTCCCTGGAAACCACCACGGCCACGAGC 4382116 Query 11669 GCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTG 11728 || | |||| |||||||||||| |||||||| |||||||| || || |||| | Sbjct 4382115 GCGT----CCGATAGCGTCAATCTCGTCGATGAAGACGATACAAGGAGCCTTCTCACGAG 4382060 Query 11729 CCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGT 11788 |||| | || || |||||||| ||| || || || || || |||||||| ||||||| Sbjct 4382059 CCTGCTTAAAGAGGTCACGTACCCGCGAGGCACCTACCCCCACAAACATCTCCACGAAGT 4382000 Query 11789 TTGCGGCAGAACACTGA-ATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGG 11847 || ||| | | || | |||||||||| | |||||||| | ||| ||| || Sbjct 4381999 CTGAACCAG-AGATGGAGAAGAAGGGAACAGCTGCTTCACCAGCCACTGCTTTAGCCAGC 4381941 Query 11848 AGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCA 11907 | |||||||| || || || | || | || | | || |||||||| |||| Sbjct 4381940 AAGGTCTTACCAGTTCCCGGAGGGCCTACCAGCAAAACACCCTTAGGGATCTTACCACCC 4381881 Query 11908 CTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTG 11967 | || ||| | ||| ||||| |||||||| || |||||| | ||| |||||| Sbjct 4381880 AGTGCAGTGTATTTTTTAGGATTCTTAAGGAAGTCAACGATCTCCATTACTTCTTCCTTG 4381821 Query 11968 GCGGAGTCGATACCCTCAACATCGG 11992 || ||| | || ||||||||| Sbjct 4381820 GCTTCGTCCAGGCCAGCAACATCGG 4381796 >seq207 Length=238886 Score = 194 bits (214), Expect = 2e-44 Identities = 343/492 (70%), Gaps = 10/492 (2%) Strand=Plus/Minus Query 11490 CACCTGAATCTTACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGAC 11549 |||| | | | | || ||||| || || |||||||| || || || || || || |||| Sbjct 185495 CACCAGCACCCTGCGGTCGAAGCGGCCGGGGCGGAGCAGGGCGTCGTCGAGGATGTCGAT 185436 Query 11550 ACGGTTTGTAGCGGCAATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGT 11609 |||||| || || || ||||| | | ||| | | |||| |||||||| || Sbjct 185435 ACGGTTGGTGGCAGCCATGACGATCACGCCCGGGTTGCCCACGAAGCCGTCCATCTCCAC 185376 Query 11610 GAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGA---GGGCATACCACCTGCCGA 11666 ||| | |||||| | |||||| |||||||| |||||| || ||| || | ||||| Sbjct 185375 GAGCATCTGGTTCAGCGTCTGCTCACGCTCGTCGTTGCCACCGGCCATGCCGC-TGCCG- 185318 Query 11667 ACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACG 11726 |||| | ||||| ||||| ||||| |||||||| | ||| ||||| ||| | Sbjct 185317 -CGCTGCCGGCCGACGGCGTCGATCTCGTCGATGAAGATGATGCACGGCGAGTTCTCTTT 185259 Query 11727 TGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAA 11786 |||| ||||| | || || |||||| || || || || ||||||||||||||||| Sbjct 185258 CGCCTTGTCGAACAAGTCGCGCACACGCGCGGCACCTACGCCCACGAACATCTCAACGAA 185199 Query 11787 GTTTGCGGCAGAACACTGAATGAA-GGGAACATTAGACTCACCAGCGATGGCTCGAGCGA 11845 | | | ||| ||||| ||| || | ||| || |||| ||| || |||| Sbjct 185198 CTCGGACCCGGAAGTGGCGATGAACGGGCAC-CCGGCCTCGCCGGCGACGGCACGGGCGA 185140 Query 11846 GGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCAC 11905 ||||||||||||||| || || | || |||||| |||| || ||||||||||| | Sbjct 185139 TGAGAGTCTTACCCGTTCCGGGAGGCCCCTCGAGAATCACGCCGCGAGGGATCTTGGCGC 185080 Query 11906 C-ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCC 11964 | || | ||| || || ||||||||||||||||| | |||||| || || | Sbjct 185079 CGACCT-TTGTGTATTTGTCGGGGTTCTTGAGGAAGTCCACCACCTCCTCGAGCTCGAAC 185021 Query 11965 TTGGCGGAGTCG 11976 |||||||| ||| Sbjct 185020 TTGGCGGAATCG 185009 >seq244 Length=185980 Score = 156 bits (172), Expect = 5e-33 Identities = 334/492 (68%), Gaps = 18/492 (4%) Strand=Plus/Plus Query 11499 CTTACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGT 11558 || ||| |||||||| || || || || || || || |||| ||| |||||| || Sbjct 158993 CTGACGGTCGAAACGGCCGGGACGCAGCAGCGCGGGGTCCAGAACGTCGCGACGGTTGGT 159052 Query 11559 AGCGGCAATGACTACAATGCCAGTCTCATTG---TCGAAACCGTCCATTTCTGTGAGAAG 11615 ||||| | || | || || ||| ||| || || ||||||||||| || || Sbjct 159053 GGCGGCCAGGATGA---TGACACCCTCGTTGGCCTCAAACCCGTCCATTTCGACCAGCAG 159109 Query 11616 CTGGTTGATCGTCTGTTCACGCTCATCGTTGGAG--GGCATACCACCTGCCGAACGCTTC 11673 |||||| | ||||||||| || || ||||| | |||| | | || ||| | Sbjct 159110 CTGGTTCAGCGTCTGTTCGCGTTCGTCGTTACCACCGCCATAGC--CGGCACCACGATGG 159167 Query 11674 TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGT 11733 ||| || ||||| || || |||||||| |||||||| ||| ||| |||||| Sbjct 159168 CGACCCACGGCGTCGATTTCGTCGATGAAGACGATACAGGGTGCGTTCTTCTTGGCCTGT 159227 Query 11734 TCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCG 11793 ||||| | || || ||||| || || ||||| |||||||| |||||||||| | | Sbjct 159228 TCGAACATGTCGCGGACACGGGATGCACCCACACCAACGAACATTTCAACGAAGTCCGAG 159287 Query 11794 GCAGA-ACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGT 11852 | || | |||| |||||| || | ||||||||||||||| || || || || || Sbjct 159288 CCCGAGATGGTGAA-GAAGGGCACGCCCGCCTCACCAGCGATGGCACGGGCCAGCAGCGT 159346 Query 11853 CTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC---ACT 11909 |||||| || || || | ||| | ||||| ||||| |||||||||| | || || Sbjct 159347 CTTACCGGTGCCCGGAGGGCCAACCAGAAGCGCGCCTTTGGGGATCTTGCCGCCGAGACG 159406 Query 11910 TCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 | || | || || || ||||| || || ||||| || || || |||||||| Sbjct 159407 GCTGAACT---TCTGCGGGTTGCGCAGGAATTCGACGATCTCTTCCAGCTCTTCCTTGGC 159463 Query 11970 GGAGTCGATACC 11981 |||||| || Sbjct 159464 TTCGTCGATGCC 159475 >seq566 Length=34611 Score = 118 bits (130), Expect = 1e-21 Identities = 278/412 (67%), Gaps = 26/412 (6%) Strand=Plus/Minus Query 11499 CTTACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGT 11558 || ||| || |||||||||||||| || | || |||||| | || |||||| || Sbjct 15010 CTGACGGTCAAAACGACCTGGGCGCAGCAATGCTGGATCAAGCACGTCAGGACGGTTGGT 14951 Query 11559 AGCGGCAATGACTACAATGCCAGTCTCATTG---TCGAAACCGTCCATTTCTGTGAGAAG 11615 ||| ||||| | |||| | | ||||| || ||||| ||||| || || | Sbjct 14950 AGCCGCAATAAG---AATGATACTTTCATTCGCTTCAAAACCATCCATCTCAACAAGCAA 14894 Query 11616 CTGGTTGATCGTCTGTTCACGCTCATCGTTGG-AGGGC--ATACCACCTGCCGAACGCTT 11672 ||||| | || || ||||||||||| || | || | |||| | ||| ||| | Sbjct 14893 TTGGTTCAATGTTTGCTCACGCTCATCATTACCACCGCCAAGACCAGC-GCC--ACGATG 14837 Query 11673 CTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTG 11732 ||| ||||| |||||||||||||| || | ||| || ||| ||| ||||| Sbjct 14836 ACGACCCACAGCATCAATCTCATCGATAAAGATGATGCAAGGTGAGTTTTTCTTAGCCTG 14777 Query 11733 TTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGC 11792 |||||| | ||||| ||||| || || ||||| |||||||| ||||| |||| Sbjct 14776 TTCGAACATGTCACGCACACGAGATGCACCCACACCCACGAACATTTCAACAAAGT---- 14721 Query 11793 GGCAGAACACTGA-AT------GAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGA 11845 |||||| |||| || ||| || ||||| | |||||||| | | || || | Sbjct 14720 --CAGAAC-CTGAGATTGTGTAGAACGGTACATTTGCTTCACCAGCAACTGAACGCGCAA 14664 Query 11846 GGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGAT 11897 | || || ||||| ||||| || | ||| | ||||| | ||||| || || Sbjct 14663 GAAGTGTTTTACCAGTACCTGGAGGTCCAACAAGAAGCACACCACGAGGAAT 14612 >seq3 Length=4400433 Score = 109 bits (120), Expect = 6e-19 Identities = 273/406 (67%), Gaps = 14/406 (3%) Strand=Plus/Minus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 || |||||||| ||||| || || | ||| || || | || ||||| || || Sbjct 1814016 CGGTCGAAACGGCCTGGACGCAGCAAGGCAGGGTCGAGCACGTCTGGGCGGTTGGTCGCC 1813957 Query 11563 GCAATGACTACAATGCCAGTCTCATTG---TCGAAACCGTCCATTTCTGTGAGAAGCTGG 11619 || | || | ||| || |||||| || || |||||||| || || |||||| Sbjct 1813956 GCGACGATGATAATCCCG---TCATTGGCTTCAAACCCGTCCATCTCGACCAGGAGCTGG 1813900 Query 11620 TTGATCGTCTGTTCACGCTCATCGTTGGAGG-GC--ATACCACCTGCCGAACGCTTCTTA 11676 || | ||| || |||||||| || || | || | ||| | |||| || | Sbjct 1813899 TTCAGCGTTTGCTCACGCTCGTCATTCCCGCCGCCAAGACCGGC-GCCG--CGTGAGCGA 1813843 Query 11677 CCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTG-GCACGTGCCTGTTC 11735 ||||| ||||| |||||||||||||| | ||| || || ||| || | || ||||| Sbjct 1813842 CCGACCGCGTCGATCTCATCGATGAAGATGATGCATGGCGCATTGCGCTTG-GCTTGTTC 1813784 Query 11736 GAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGC 11795 ||| | || || ||||| | || || ||||| || ||||| ||||| |||| | | | Sbjct 1813783 GAACATGTCGCGGACACGGCTGGCGCCGACACCGACAAACATTTCAACAAAGTCAGAGCC 1813724 Query 11796 AGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTT 11855 ||| | || ||| || || | || || |||||||| || ||||| || || || Sbjct 1813723 TGAAATCGTAAAGAATGGCACGCCTGCTTCGCCTGCGATGGCGCGCGCGAGCAGGGTTTT 1813664 Query 11856 ACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTG 11901 ||| || || || | ||| |||| || ||||| |||||||||| Sbjct 1813663 ACCGGTTCCTGGAGGGCCAACGAGCAGCGCGCCTTTGGGGATCTTG 1813618 >seq2 Length=6328565 Score = 84.2 bits (92), Expect = 3e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 31307 CTCGGGAACATAGAGGCTCGTCGAGATTGGGGTCATGCGAAGGACTACGTGGAGGCCATG 31366 ||||| ||| | || || || |||||||| ||||| | || || || || |||||| Sbjct 820879 CTCGGAAACCTCGATGCGAAACGCGATTGGGGACATGCTCAAGATTATGTTGAAGCCATG 820938 Query 31367 TGGCTCATGCTTCAACAAGAACGTCCAGATGATTATGTCGTCGCAACAGGTAAATCACAT 31426 ||||||||| | || |||||| ||| ||||| || ||||| ||||| || || | | Sbjct 820939 TGGCTCATGTTACAGCAAGAAACTCCGGATGACTACGTCGTAGCAACTGGCGAAACGCGC 820998 Query 31427 TCTGTACGGGAGTT 31440 ||||| || ||||| Sbjct 820999 TCTGTTCGCGAGTT 821012 >seq223 Length=213198 Score = 82.4 bits (90), Expect = 9e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 110503 CCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGA 110562 || || ||||||||||||||||| | || || ||| ||| || | || || || || Sbjct 55706 CCCTCTTCCTCGTACTTGGTGTATAGATCTTCGAATGCCTCGCCATGGACGTCGGACAGG 55647 Query 110563 CCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATG 110622 ||| | |||| || ||| |||| || | ||| | ||| || |||||||||||| Sbjct 55646 CCCGTTGCCTCGTTGGGTGAGAACAGCGCCCACTGTCCGTTGGATTCCACCCTCTTCATG 55587 Query 110623 AACAGGTCAGGAATCCACATCGCCGAGAAAAGGTC 110657 |||| ||| || | ||||| ||| |||| ||||| Sbjct 55586 AACAAGTCCGGCACCCACAGCGCAAAGAAGAGGTC 55552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588970610869600