Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1 102 7e-16 >seq1 Length=7344524 Score = 102 bits (112), Expect = 7e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 550331 ATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA 550390 ||||| | |||||| | ||| |||||| | || || | ||| | || ||||| Sbjct 802316 ATTTCTGCGATGGTTCTGCAGAAGATGAAAAAGACTGCTGAAGATTTCCTCGGACAAGAG 802375 Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 || ||||| || || | ||||| || || ||||| || ||||| || ||||| |||||| Sbjct 802376 GTGACGGAAGCGGTTGTTACTGTTCCTGCCTATTTCAACGACTCTCAGCGTCAGGCTACT 802435 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 ||||| ||||| |||||||| || || | ||||| ||||| || ||||||||| Sbjct 802436 AAAGAAGCTGGTGAGATTGCTGGTCTGAAGATCAGCCGTATCATCAACGAGCCTACTGCT 802495 Query 550511 GCTGCACTTGCATATGGACTTGATAAACA 550539 || || || | || || || || || || Sbjct 802496 GCAGCCCTGTCGTACGGCCTGGACAAGCA 802524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029257288538680