Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_016158.1 Length=49576 Score E Sequences producing significant alignments: (Bits) Value seq493 95.1 4e-15 >seq493 Length=52014 Score = 95.1 bits (104), Expect = 4e-15 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 12181 GCTGGAATCTCCGTTGGTCAGTACAGCGCAGCAATGCGTACGCTTCCGGCTCAGTTCACG 12240 || || || ||||| || ||||| | || || ||||||| ||| || || |||||||| Sbjct 17728 GCGGGGATTTCCGTCGGGCAGTATAAAGCCGCCATGCGTATGCTGCCTGCACAGTTCACC 17787 Query 12241 GATATCGCCACGCAGTTAGCTGGTGGGCAGTCGCCGTTCCTGATTCTGCTGCAACAGGGC 12300 || | ||||||||| | || || ||||| |||| ||||| |||||||||||||| Sbjct 17788 GACGTGGCCACGCAGCTTGCAGGCGGGCAAAGTCCGTGGCTGATCCTGCTGCAACAGGGG 17847 Query 12301 GGGCAGATTAAAGAC 12315 |||||| | || ||| Sbjct 17848 GGGCAGGTGAAGGAC 17862 Score = 95.1 bits (104), Expect = 4e-15 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 12181 GCTGGAATCTCCGTTGGTCAGTACAGCGCAGCAATGCGTACGCTTCCGGCTCAGTTCACG 12240 || || || ||||| || ||||| | || || ||||||| ||| || || |||||||| Sbjct 22308 GCGGGGATTTCCGTCGGGCAGTATAAAGCCGCCATGCGTATGCTGCCTGCACAGTTCACC 22367 Query 12241 GATATCGCCACGCAGTTAGCTGGTGGGCAGTCGCCGTTCCTGATTCTGCTGCAACAGGGC 12300 || | ||||||||| | || || ||||| |||| ||||| |||||||||||||| Sbjct 22368 GACGTGGCCACGCAGCTTGCAGGCGGGCAAAGTCCGTGGCTGATCCTGCTGCAACAGGGG 22427 Query 12301 GGGCAGATTAAAGAC 12315 |||||| | || ||| Sbjct 22428 GGGCAGGTGAAGGAC 22442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 158520222050992