Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_016163.1 Length=262391 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 2e-15 seq2 98.7 2e-15 >seq3 Length=4400433 Score = 98.7 bits (108), Expect = 2e-15 Identities = 72/84 (86%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 67745 ATGCGAATGTGGCGAAATTGGTAGACGCCCCAGATTTAGGTTCTGGTATCGAAAGGTGTG 67804 ||||| |||||||||||||||||||||| ||||||||||||||||| || ||| ||| Sbjct 3471662 ATGCGGATGTGGCGAAATTGGTAGACGCACCAGATTTAGGTTCTGGCGCCGCGAGGCGTG 3471721 Query 67805 TGGGTTCGACTCCCTCCATTCGCA 67828 |||||| | ||||||||| |||| Sbjct 3471722 GGGGTTCAAGTCCCTCCATCCGCA 3471745 >seq2 Length=6328565 Score = 98.7 bits (108), Expect = 2e-15 Identities = 72/84 (86%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 67745 ATGCGAATGTGGCGAAATTGGTAGACGCCCCAGATTTAGGTTCTGGTATCGAAAGGTGTG 67804 ||||| |||||| ||||||||||||| | |||||||||||||||||| || |||| ||| Sbjct 3326231 ATGCGGATGTGGTGAAATTGGTAGACACGCCAGATTTAGGTTCTGGTGCCGCAAGGCGTG 3326172 Query 67805 TGGGTTCGACTCCCTCCATTCGCA 67828 |||||| | ||||||||| |||| Sbjct 3326171 GGGGTTCAAGTCCCTCCATCCGCA 3326148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 839515518362720