Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_016650.1 Length=48072 Score E Sequences producing significant alignments: (Bits) Value seq19 91.5 5e-14 seq5 87.8 6e-13 seq4 87.8 6e-13 >seq19 Length=1029424 Score = 91.5 bits (100), Expect = 5e-14 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 46649 GTAGCTCAATTGGTAGAGCACCGGTCTCCAAAGCCGGTGGTTGGGGGTTCGAGTCCCTCC 46708 ||||||||||||| |||||| ||||||||||| ||| |||||||||||||| ||||||| Sbjct 1022412 GTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGATTCCCTCC 1022353 Query 46709 GGGCCTGC 46716 ||||||| Sbjct 1022352 TGGCCTGC 1022345 >seq5 Length=3486096 Score = 87.8 bits (96), Expect = 6e-13 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 46649 GTAGCTCAATTGGTAGAGCACCGGTCTCCAAAGCCGGTGGTTGGGGGTTCGAGTCCCTCC 46708 |||| |||||||||||||| ||||||||||| ||| ||||||||||||||||||||| Sbjct 711218 GTAGTTCAATTGGTAGAGCGTCGGTCTCCAAAACCGAAAGTTGGGGGTTCGAGTCCCTCC 711277 Query 46709 GGGCCTGC 46716 ||||||| Sbjct 711278 TGGCCTGC 711285 >seq4 Length=3599618 Score = 87.8 bits (96), Expect = 6e-13 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 46649 GTAGCTCAATTGGTAGAGCACCGGTCTCCAAAGCCGGTGGTTGGGGGTTCGAGTCCCTCC 46708 |||||||||||||||||||| ||||||||||| ||| ||||| |||||| ||||||||| Sbjct 3258217 GTAGCTCAATTGGTAGAGCATCGGTCTCCAAAACCGAGGGTTGCGGGTTCAAGTCCCTCC 3258158 Query 46709 GGGCCTGC 46716 ||| ||| Sbjct 3258157 TGGCGTGC 3258150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 153707463886256