Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_016655.1 Length=51342 Score E Sequences producing significant alignments: (Bits) Value seq19 107 6e-19 seq198 80.6 9e-11 >seq19 Length=1029424 Score = 107 bits (118), Expect = 6e-19 Identities = 125/169 (74%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 24820 ACGGAAAGCTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGT 24879 |||||| ||| |||||||||||||||||||||||| ||| | ||||| |||||||||| Sbjct 785163 ACGGAAGGCTTTCCTGCCAGCTCTACCAGCGCAGCGCCGACCTGTTCCTGGGCGTGCCGT 785104 Query 24880 TCAATATCGCGAGCTACGCGCTGCTGACCCATTTCTTCGCGGACCAGCTCGGACTGAAGG 24939 ||||||| || |||||| ||||| || || | | || | ||| || ||| ||| Sbjct 785103 TCAATATTGCCTCCTACGCTCTGCTCACGCACATGATTGCCCAACAGTGCGACCTGGAGG 785044 Query 24940 TCGGCGAATTCATCTGGACCGGCGGCGACGTCCACCTGTATTCGAACCA 24988 | || || ||| | ||| ||||||| |||||||| |||||| Sbjct 785043 TTGGAGAGTTCGTGCATACCTTCGGCGACTGTCACCTGTACCAGAACCA 784995 >seq198 Length=250510 Score = 80.6 bits (88), Expect = 9e-11 Identities = 67/82 (82%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 24826 AGCTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGTTCAATA 24885 ||||| ||||||| | |||||||||||||||||| | ||||| ||||| ||||||| Sbjct 64045 AGCTGTCCTGCCAGATGTACCAGCGCAGCGCGGACATGGGTCTCGGGGTGCCTTTCAATA 63986 Query 24886 TCGCGAGCTACGCGCTGCTGAC 24907 |||| |||||||||||| || Sbjct 63985 TCGCCTCCTACGCGCTGCTCAC 63964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164171372927936