Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_018279.1 Length=49116 Score E Sequences producing significant alignments: (Bits) Value seq493 120 1e-22 >seq493 Length=52014 Score = 120 bits (132), Expect = 1e-22 Identities = 69/71 (97%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 27830 ATCTCCATAAAACAAAACCCGCCGTAGCGAGTTCAGATAAAAGAAATCCCCGCGAGCGCG 27889 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| Sbjct 47257 ATCTCCATAAAACAAAACCCGCCGTAGCGAGTTCAGATAAAATAAATCCCCGCGAGTGCG 47316 Query 27890 AGGATTGTTAT 27900 ||||||||||| Sbjct 47317 AGGATTGTTAT 47327 Score = 120 bits (132), Expect = 1e-22 Identities = 69/71 (97%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 27830 ATCTCCATAAAACAAAACCCGCCGTAGCGAGTTCAGATAAAAGAAATCCCCGCGAGCGCG 27889 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| Sbjct 50037 ATCTCCATAAAACAAAACCCGCCGTAGCGAGTTCAGATAAAATAAATCCCCGCGAGTGCG 50096 Query 27890 AGGATTGTTAT 27900 ||||||||||| Sbjct 50097 AGGATTGTTAT 50107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157048234846352