Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_019404.1 Length=46054 Score E Sequences producing significant alignments: (Bits) Value seq493 86.0 2e-12 >seq493 Length=52014 Score = 86.0 bits (94), Expect = 2e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 16808 GGTGGGAAGTATCAGCCAGCAGGAACGGTGCACCGTGGTGAGTTTGTATTCACAAAAGAA 16867 || || || ||| ||||||| || | || ||||||||||||||||| ||||| || || Sbjct 19780 GGCGGCAAATATGAGCCAGCGGGGATTGTTCACCGTGGTGAGTTTGTCTTCACGAAGGAG 19839 Query 16868 GCGACAAGCAGAATTGGCGTGAAAAACCTTTACGCGCTGATGAAGGGTTATGCGAATGGC 16927 || || ||| | ||||||||| || |||||| ||||||| || ||||| | ||| Sbjct 19840 GCAACCAGCCGGATTGGCGTGGGGAATCTTTACCGGCTGATGCGCGGCTATGCCACCGGC 19899 Query 16928 GG 16929 || Sbjct 19900 GG 19901 Score = 86.0 bits (94), Expect = 2e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 16808 GGTGGGAAGTATCAGCCAGCAGGAACGGTGCACCGTGGTGAGTTTGTATTCACAAAAGAA 16867 || || || ||| ||||||| || | || ||||||||||||||||| ||||| || || Sbjct 24360 GGCGGCAAATATGAGCCAGCGGGGATTGTTCACCGTGGTGAGTTTGTCTTCACGAAGGAG 24419 Query 16868 GCGACAAGCAGAATTGGCGTGAAAAACCTTTACGCGCTGATGAAGGGTTATGCGAATGGC 16927 || || ||| | ||||||||| || |||||| ||||||| || ||||| | ||| Sbjct 24420 GCAACCAGCCGGATTGGCGTGGGGAATCTTTACCGGCTGATGCGCGGCTATGCCACCGGC 24479 Query 16928 GG 16929 || Sbjct 24480 GG 24481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147249920018944