Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_019445.1 Length=44784 Score E Sequences producing significant alignments: (Bits) Value seq6 86.0 2e-12 seq3 86.0 2e-12 seq2 80.6 8e-11 >seq6 Length=3173221 Score = 86.0 bits (94), Expect = 2e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 14420 TGGCGTGGCATGCAGGATTCGAACCTGCGACCAACCGCTTAGAAGGCGGTTGCTCTGTCC 14479 ||||| | | |||||| ||||||||||||||| ||||||||||||||| |||||| ||| Sbjct 2219892 TGGCGCGCCCGGCAGGACTCGAACCTGCGACCATCCGCTTAGAAGGCGGATGCTCTATCC 2219833 Query 14480 AACTGAGCTA 14489 | |||||||| Sbjct 2219832 AGCTGAGCTA 2219823 >seq3 Length=4400433 Score = 86.0 bits (94), Expect = 2e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 14419 CTGGCGTGGCATGCAGGATTCGAACCTGCGACCAACCGCTTAGAAGGCGGTTGCTCTGTC 14478 |||||| | |||||||||||||||||||||| ||| ||||||| ||| |||||| || Sbjct 3743424 CTGGCGACCCCTGCAGGATTCGAACCTGCGACCGTCCGATTAGAAGTCGGGTGCTCTATC 3743483 Query 14479 CAACTGAGCTAA 14490 |||||||||||| Sbjct 3743484 CAACTGAGCTAA 3743495 >seq2 Length=6328565 Score = 80.6 bits (88), Expect = 8e-11 Identities = 64/77 (83%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 14413 GTGATTCTGGCGTGGCATGCAGGATTCGAACCTGCGACCAACCGCTTAGAAGGCGGTTGC 14472 |||| | ||||| | |||||||||||||||||||||| ||||||||||||| ||| Sbjct 2784474 GTGAATTTGGCGACCCCGGCAGGATTCGAACCTGCGACCATTCGCTTAGAAGGCGAGTGC 2784415 Query 14473 TCTGTCCAACTGAGCTA 14489 ||| |||| |||||||| Sbjct 2784414 TCTATCCAGCTGAGCTA 2784398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143185955345264