Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_019503.1 Length=166499 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 7e-12 >seq1 Length=7344524 Score = 86.0 bits (94), Expect = 7e-12 Identities = 253/383 (66%), Gaps = 19/383 (5%) Strand=Plus/Minus Query 140248 TTGCTCAATATGGTTAGAATAAATGTGTGTATTACCACCCGAGAAT--ACCAAATCGCCC 140305 |||||| ||||| ||| ||| | ||||| || ||| || || || ||||||||| Sbjct 588390 TTGCTCCATATGATTATTATAGAGGTGTGCATCGCCAAA--AGTATGGACAAAATCGCCC 588333 Query 140306 GGAACTAGTTCACACATATCAGCAACAATATGTAAAAGAGCA--GCATAACTCGCGATGT 140363 | ||||| || | | ||| | | ||| | ||||| ||||| || || || | Sbjct 588332 ACTTCCAGTTCGCAAACCTGAGCTATCAAATG--AGTGAGCAAGGCATAGCTTGCTATAT 588275 Query 140364 TAAATGGAAGACCGAGGAAAACATCTACCGAACGTTGATACCATTGG-AGGTCAAGGTAT 140422 |||| || | || || || ||||| | ||||| || ||| |||| | | ||| | Sbjct 588274 TAAAAGGTACCCCCAGAAATACATCAGCAGAACGCTGGTACAGTTGGCACGACAATTTC- 588216 Query 140423 CCATTACGCACATTAAACTGATAGAACATATGACAAGGTGGTAA---TGCCATCTGCTTG 140479 |||| | ||| | ||| || ||| | ||||| |||||||| |||| | | || Sbjct 588215 CCATCAGCCACGTAAAATTGGAAGAGGGTGTGACACGGTGGTAACCCTGCCTTGACCATG 588156 Query 140480 ------AGTTCAGCTGGATTCCATGCCGACACAATTTGACGTCTATCATTGGGAAATGTT 140533 | || | ||| ||||| ||||| ||||| || || | | || ||| || Sbjct 588155 CCGGGGATATCCGGTGGGTTCCAGGCCGAAACAATATGCCGACGAGAATCCGGATTCTTT 588096 Query 140534 TTAATACGATTAACAACTTCTACAATTTGATCTACACCACCAAAATCACGCCACTGTTTT 140593 ||||| || ||||| |||| ||||| ||||| || ||||| ||||||||||| Sbjct 588095 TTAATGTTGGCTACTACTTCAGCAATCTGATCCACACCGCCGAAATCGCGCCACTGTTTC 588036 Query 140594 CCGTAAATTGGACCAAGTTCACC 140616 ||||| | || || ||||| || Sbjct 588035 CCGTAGACCGGTCCCAGTTCGCC 588013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532663926080480