Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_019514.1 Length=74669 Score E Sequences producing significant alignments: (Bits) Value seq6 120 1e-22 >seq6 Length=3173221 Score = 120 bits (132), Expect = 1e-22 Identities = 189/269 (70%), Gaps = 4/269 (1%) Strand=Plus/Plus Query 17060 GCTGCTGTGCTGCTGCCTCGCAGTGGCCTTGGGCATAAATCTGGCATTGTACTTGGGAAC 17119 || ||| || | ||||| | ||||| || || || ||| |||||||||||||| || Sbjct 938316 GCGGCTATGATCCTGCCCAGAAGTGGGCTCGGCCACAAACACGGCATTGTACTTGGCAAT 938375 Query 17120 CTGGTGGGTCTGATTGATTCGGACTATCAGGGTGAGCTGAAGGTTTCCCTGTGGAACCGC 17179 |||||||| |||| |||||||| || ||||| ||| ||| ||| ||| ||||||||| Sbjct 938376 CTGGTGGGGTTGATCGATTCGGATTACCAGGGCGAGTTGATGGTGTCCTGCTGGAACCGC 938435 Query 17180 AGCGCTGAACCA--TACACTGTCAGCCCTGGTGAGCGTGTTGCCCAAATGGTTATCGTGC 17237 || | |||| | ||||| || ||||| | ||||| |||| | |||| Sbjct 938436 --GGCCGCACCAGCTTTACTGTGGATGTGGGCGAGCGCCTGGCCCAGTTGGTGCTGGTGC 938493 Query 17238 CAGTAGTGCAGGCACAGTTTGAGCTGGTTGATGAATTCACTGCTTCAGAACGTGGAGACG 17297 | || || ||||| | |||||| ||||| ||||| || | ||||| |||| Sbjct 938494 CGGTCGTCCAGGCCGATTTTGAGGTGGTTTCGGAATTTGACGCCAGTGCGCGTGGTGACG 938553 Query 17298 GCGGATTTGGCCACACCGGAGCGCTGTGA 17326 |||| |||||| |||||| ||| |||| Sbjct 938554 GCGGTTTTGGCTCCACCGGTACGCGGTGA 938582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238813869462760