Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_019517.1 Length=136947 Score E Sequences producing significant alignments: (Bits) Value seq4 84.2 2e-11 seq60 82.4 7e-11 >seq4 Length=3599618 Score = 84.2 bits (92), Expect = 2e-11 Identities = 67/80 (84%), Gaps = 2/80 (3%) Strand=Plus/Plus Query 61195 TAAAG--GTGGTCTCCACGGAGTGATTCGAACACTCGACCTCCTGATCCCAAATCAGGCG 61252 ||||| |||||| |||| | ||||||||| | |||| ||||| ||||||| |||||| Sbjct 3361096 TAAAGAAGTGGTCGGGACGGCGAGATTCGAACTCACGACATCCTGCTCCCAAAGCAGGCG 3361155 Query 61253 CTCTACCAAGCTGAGCTACG 61272 |||||||| ||||||||||| Sbjct 3361156 CTCTACCAGGCTGAGCTACG 3361175 >seq60 Length=599436 Score = 82.4 bits (90), Expect = 7e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 61378 AGGACTCGAACCTGCAACCTATTGATTACAAATCAATTGCACTACCAATTGTGCTACATC 61437 |||||| |||||| ||||||| ||||||||||||| |||| |||||||||| |||||| | Sbjct 72261 AGGACTTGAACCTTCAACCTACTGATTACAAATCAGTTGCTCTACCAATTGAGCTACACC 72202 Query 61438 AGC 61440 ||| Sbjct 72201 AGC 72199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 438098391363040