Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_019709.1 Length=41567 Score E Sequences producing significant alignments: (Bits) Value seq493 154 4e-33 >seq493 Length=52014 Score = 154 bits (170), Expect = 4e-33 Identities = 99/108 (92%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 23786 TGCGGCTTCCAGCTCAACGCGCAACTTCCCTACCGTTAGCGCAATATCCTCGTTCTCCTG 23845 ||| | ||| |||||||| |||| |||||||| |||||||||||||||||||||||||| Sbjct 48137 TGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTCCTG 48196 Query 23846 ATCGCGGCGTTTTATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAG 23893 ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 48197 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAG 48244 Score = 154 bits (170), Expect = 4e-33 Identities = 99/108 (92%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 23786 TGCGGCTTCCAGCTCAACGCGCAACTTCCCTACCGTTAGCGCAATATCCTCGTTCTCCTG 23845 ||| | ||| |||||||| |||| |||||||| |||||||||||||||||||||||||| Sbjct 50917 TGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTCCTG 50976 Query 23846 ATCGCGGCGTTTTATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAG 23893 ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 50977 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAG 51024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132891644829336