Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_019714.1 Length=39026 Score E Sequences producing significant alignments: (Bits) Value seq493 86.0 2e-12 >seq493 Length=52014 Score = 86.0 bits (94), Expect = 2e-12 Identities = 84/106 (79%), Gaps = 2/106 (2%) Strand=Plus/Plus Query 20567 GCCGCAACCATGCCGTATGCAAGAGCATGATTGCGGCCGACTAGCGAACGTTCGATAGTG 20626 |||||| || | |||||||| || | || | ||||| | || | |||| | |||||||| Sbjct 39891 GCCGCAGACACGTCGTATGCAGGAACGTGCT-GCGGCTGGCTGGTGAACTTCCGATAGTG 39949 Query 20627 CGAGTATTGAATGATTTCCAGCCGTTACCGATTTTAC-TATGTTTT 20671 || || ||||||||||||||| | |||||||||||| ||| |||| Sbjct 39950 CGGGTGTTGAATGATTTCCAGTTGCTACCGATTTTACATATTTTTT 39995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124760515509792