Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_019927.1 Length=47611 Score E Sequences producing significant alignments: (Bits) Value seq6 84.2 7e-12 >seq6 Length=3173221 Score = 84.2 bits (92), Expect = 7e-12 Identities = 150/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 42969 GCTCAC-GCGTGGCCGATTTGACCGTGGCGAGTACCAAAAACTACAACCTCAATTCAAAC 43027 |||||| |||| || ||| |||| || | |||||||||||||||||| | || || | Sbjct 1496416 GCTCACCGCGTCGCTGATCTGACAGTCGGTAGTACCAAAAACTACAACATTAACTC-GGC 1496474 Query 43028 AA--TTTCGTTAAAGGTGCTCGCGTTCAGGGAGAAGACTCGGCTCCCGTGGTAATTTTCC 43085 || |||| | ||||||| ||| || || || ||| | ||||| || | || | Sbjct 1496475 AAGCTTTC-TGAAAGGTGATCGGGTAACTGGCGAGGACATCGTGCCCGTCGTTCTCTTTC 1496533 Query 43086 CTCTCGGCATTCCCAATGTGAAGACTGCTATCGACAGAGCTATTGAGAAGAATCGTTGCT 43145 | || || || |||||||| ||||| ||| | || |||||||| || |||| ||| Sbjct 1496534 CGCTTGGTATCCCCAATGTTAAGACAGCTGTAGATGATGCTATTGAAAAAGATCGGTGCG 1496593 Query 43146 CAGTTGCGCTTTCTGATGTCGTTGTGACTCAGT 43178 | |||| | |||||| | ||| | || |||| Sbjct 1496594 CCGTTGGTTTGTCTGATCTTGTTATAAC-CAGT 1496625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152232276709432