Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= NC_020489.1 Length=40489 Score E Sequences producing significant alignments: (Bits) Value seq642 134 4e-27 >seq642 Length=18206 Score = 134 bits (148), Expect = 4e-27 Identities = 253/367 (69%), Gaps = 19/367 (5%) Strand=Plus/Plus Query 27154 AACTCCTCGACGTTTTCGAGAAGGATCACGTCAGGGCGCTGCGCGCGGGGCAGATCCGCC 27213 ||||| |||||||||||||| | || ||| | | || |||| ||| ||| | Sbjct 2208 AACTCTTCGACGTTTTCGAGGATGACCAC---ACGCGGCCGCGCACGGCGCAA------C 2258 Query 27214 CAGCGGATCACCACCCACGCGAGATCGCGGATATTGCGGTCG--CGGACGCTTGCGCCCT 27271 ||| ||| || |||||| || ||||| | |||||| | | |||||| || |||| Sbjct 2259 CAGACGATGACAGTCCACGCCAGGTCGCGAACATTGCGCTTGACCGGACGG--GCACCCT 2316 Query 27272 TCGCCTTCGAGAAATGCTTGCAGTCCGGCGAGGCCCATACCATGCCGACCTTGCGGCCCG 27331 | |||||||| |||||||||||||| ||||| ||||| | || ||| | || || | | Sbjct 2317 TGGCCTTCGAAAAATGCTTGCAGTCGGGCGATGCCCACAACA-GCCCAACTGGCCGGTTG 2375 Query 27332 CGGTCACGGTGGCC---GGGTCAACGTCCCAGATGTTGCTGTCGAGATGCAATGTCTCGG 27388 || | ||| || || || || | | ||||| || || ||||| || || | Sbjct 2376 TGGCAAAGGT--CCATAGGATCGACCTTGTAAATGTTCTTGGAGACATGCAGCGTTTCCG 2433 Query 27389 GGTGGTTGGCTGCATGCAGCGCCAGCGCCGCGGCAGAGTGGTTGATGGCGACATCGGGCG 27448 ||||||| || |||| || |||||| | | | |||||||| |||| ||| || Sbjct 2434 GGTGGTTCGCCCGGTGCATGGCAAGCGCCTCTGGATCGTGGTTGACCGCGATATCCGGAT 2493 Query 27449 AGCGGCCAAGGGCCTGCTCGATGCCGGTCGAGGCGCCGCCGCCTCCGGCAAAACAGTCGA 27508 |||||| || ||| | || || ||||| || |||||||| || || |||||||| | Sbjct 2494 GGCGGCCGAGTGCCAGAAAAATCCCTGTCGACGCCCCGCCGCCGCCAGCGAAACAGTCAA 2553 Query 27509 TGATGAG 27515 ||| || Sbjct 2554 CGATCAG 2560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129442074814984